Gene VSAL_p43_01 details

Gene Information

• Locus tag: VSAL_p43_01
• Symbol: repA
• ID: 6962657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011316
• Strand: +
• Start bp: 281
• End bp: 940
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 31%
• Product: putative replication initiation protein
• Protein accession: YP_002265403
• Protein GI: 215538593

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATC TCTCAGTAAC CAAATCAAAT AATCTTGTAG ATGCGAGTTA TAAATTAAAT 
GTTCAAGCAC AAAAACTTAT TTTAGCCTGC TTAGGGAAAA TAGATTCTAG AGCTGAAATT 
CCTAACGAAA TTACTATTAC CGCAATAGAA TATGGTGATT TAATGGGTAT TAGTAATGCG 
CGGAGAGATC TATATAAAGC GGCGGATCAT CTCTTTGATG CGGTAATAAC ATTAAAAGAT 
AATAACGAAG AAATAAAGTT AAGATGGGTT CAAAAAAGTG TACTAAAAAA GAAAGGTGAG 
GGTTCTGTTA CTATTACATG GTCTGATGAT GTTTTAAAAT ATATTAGCGT ACTTAAAAAT 
AGATTTACTA CATACAAATT GCGGCATATA TCCGAATTGA AATCAGGACA TTCCATTCGA 
CTGTATGAGT TATTAATGCG ATTTAATTCT ACTGGGGCTA GAATTATTTC TATTGCTGAT 
TTTAAATCGG CATTAGGTGT TAGTGATAAA TACCCTCAAT TTAAAGAATT AACACGTAGG 
GTTATCAACC CAGCTATTGA TGAATTAAAT AAAAGTAGTG ATCTTATCGT TCAATATGAA 
TCCCTTAAAA AGGGTAAAAC AGTAACTGCT TTAGCATTCT CGTTTACACA AAAGGATTAA 

 

Protein sequence

MNNLSVTKSN NLVDASYKLN VQAQKLILAC LGKIDSRAEI PNEITITAIE YGDLMGISNA 
RRDLYKAADH LFDAVITLKD NNEEIKLRWV QKSVLKKKGE GSVTITWSDD VLKYISVLKN 
RFTTYKLRHI SELKSGHSIR LYELLMRFNS TGARIISIAD FKSALGVSDK YPQFKELTRR 
VINPAIDELN KSSDLIVQYE SLKKGKTVTA LAFSFTQKD