| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_C0001 |
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| Symbol | repB |
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| ID | 6106614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010486 |
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| Strand | + |
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| Start bp | 165 |
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| End bp | 866 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641614742 |
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| Product | initiator replication protein RepB |
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| Protein accession | YP_001739883 |
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| Protein GI | 170650755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 79 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGATC TAATTGCCTA TAAATCCAAT GCGCTGGTTG AAGCCAGTTA TAAATTGACC
CTACAGGAAC AGCGATTTTT GTTACTTTGC ATCGGTCGAT TGAAGTCTGG GGCTGATGCA
GAATCTCCAA AATTGCAAAA GACAATGACC ATTACAGCTG CGGAATATTT CGATTCATTC
CCTGACATGG GGCGGAAAAA TGCCGAGGTT CAGTTACAGG AAGCAATTGA TCGTTTGTGG
GACAGGTCAA TCATTCTCAA GGATGACGAG AAACGTGAGG AGTTCCGCTG GATCCAGTAT
CGGGCACAGT ACGCTAAAGG CGAGGCCAGA GCACAAATAA CATTTTCTGA CGCAGTAATG
CCTTATTTGA CACAACTACA AGGGCAATTT ACTAGAGTTG TAATCAAGAA TATATCTAGA
TTATCAAGAA GTTACAGTAT AAGGATATAC GAACTCCTCC AGCAGTTCCG CAGTACTGGC
GAACGTATTA TCGCTCTCGA TGATTTTCGC TCAATGCTTG ATATAGAGCA TAAATATCAA
ACATATAAAT CACTTAACCA GCAATTATTA AGACCCTGCA TTGACGAACT GAACAAAAAA
AGCGACCTGG CTGTAACGGT TGAGACGATC AAAAAGGGGC GCACGGTTGT AGCCCTGCAT
TTTCGCTTCA AGGAAGACAA ACAAATCAAG ATGACGATCT AA
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| Protein sequence | MSDLIAYKSN ALVEASYKLT LQEQRFLLLC IGRLKSGADA ESPKLQKTMT ITAAEYFDSF
PDMGRKNAEV QLQEAIDRLW DRSIILKDDE KREEFRWIQY RAQYAKGEAR AQITFSDAVM
PYLTQLQGQF TRVVIKNISR LSRSYSIRIY ELLQQFRSTG ERIIALDDFR SMLDIEHKYQ
TYKSLNQQLL RPCIDELNKK SDLAVTVETI KKGRTVVALH FRFKEDKQIK MTI
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