| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | pDOJH10L_p01 |
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| Symbol | repA |
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| ID | 1257566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004252 |
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| Strand | + |
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| Start bp | 10052 |
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| End bp | 890 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642561679 |
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| Product | hypothetical protein |
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| Protein accession | NP_694594 |
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| Protein GI | 23307854 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGATG AGATCGTGAA GTACTCGAAC CAGTTCAACA ATCAGGCGCT GCGCAAGTTC
ACCGCGCTCG ATCTTGATTT GCTGATGGCC ATCGCGTCTC GCGTGCGGGA CAAGGGCACG
GACGAGGTGG CGTTCACGTT CGAAGAATTG AAGCGGCTGG CCGGACTTCA GAGGAACATG
ACCAACGATG AGTTCGCCAA GCAGATTGCC AATGTGAACC GTCGCCTGCT CGCGCTCAAC
TTCGAGTTCC AGAACGAAGA GCACGACATC ATCCAGTTCG CCCTGTTCGC AGGCTTCGTC
ACCAGCCCGA CCAAACGCAC ACTCACCGTA TCGGTGAACT CGCGCTTCTC GTTCCTGCTT
AACGACCTCA CCTCGCAGTT CACCCGCTTC GAGCTGGCCG AGTTCACGGC CCTGCGCTCC
AGCTACGCCA AGGAGTGCTA CAGGAGGCTC AAGCAGTACC GACAAACCGG TGTGTGGAAG
GTCAGCCTTG AGGACTTCCG CCGACTGCTC GACGTACCCA AATCGTATCG GCCGAGCGAA
ATCAACAAGT ATGTTCTTAA GCCGATTGAG GAGGAGTTGG GACCTCTGCT GAATCTGAAG
GTGCATCGCA AGTACCTGAA GAAGAAGCCG GGACGTGGCC GCGCTTCCCT TGTCGGGTTC
GAATTTGAAT TTGACCCGGA GAAGGTACCC GGCGGCGCTC CCGCTCCGCG CGTGGAGCTG
TCCGGCTCCG TGGTGACCGA TGAGGCGAGG AAGTCGCTCA GGGACGTGTC GAAGACGCCC
GTGCCCGATC TGTCGGTGCC GGGCGAGGGA CCGGCGCTCG ACCCTGATAC TCAGGCGTTC
CTCGACGCGC ACGGCGGTCA TGGATTCGCC GGTGCCGAGG GGTATGTCTC CGACTGGCCG
AGTGCTGCGT GA
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| Protein sequence | MSDEIVKYSN QFNNQALRKF TALDLDLLMA IASRVRDKGT DEVAFTFEEL KRLAGLQRNM
TNDEFAKQIA NVNRRLLALN FEFQNEEHDI IQFALFAGFV TSPTKRTLTV SVNSRFSFLL
NDLTSQFTRF ELAEFTALRS SYAKECYRRL KQYRQTGVWK VSLEDFRRLL DVPKSYRPSE
INKYVLKPIE EELGPLLNLK VHRKYLKKKP GRGRASLVGF EFEFDPEKVP GGAPAPRVEL
SGSVVTDEAR KSLRDVSKTP VPDLSVPGEG PALDPDTQAF LDAHGGHGFA GAEGYVSDWP
SAA
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