35 homologs were found in PanDaTox collection
for query gene Apar_1285 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013203  Apar_1285  phosphotransferase system lactose/cellobiose- specific IIB subunit  100 
 
 		 99 aa  202  9e-52  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
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NC_013517  Sterm_1465  phosphotransferase system lactose/cellobiose- specific IIB subunit  48.89 
 
 		 94 aa  91.3  4e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
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NC_013457  VEA_000772  hypothetical protein  36.26 
 
 		 95 aa  62  0.000000003  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_2056  phosphotransferase system, lactose/cellobiose-specific IIB subunit  35.11 
 
 		 95 aa  58.2  0.00000004  Psychromonas ingrahamii 37  Bacteria  normal  0.615056  normal  0.200846 
 
 
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NC_010465  YPK_1547  phosphotransferase system lactose/cellobiose-specific IIB subunit  35.56 
 
 		 95 aa  58.2  0.00000004  Yersinia pseudotuberculosis YPIII  Bacteria  hitchhiker  0.00223211  n/a   
 
 
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NC_009708  YpsIP31758_1438  PTS system, lactose/cellobiose specific IIB subunit  35.56 
 
 		 95 aa  58.2  0.00000004  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000114566  n/a   
 
 
-
 
NC_010159  YpAngola_A0343  PTS system lactose/cellobiose-specific transporter subunit IIB  35.56 
 
 		 95 aa  58.2  0.00000004  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000259876  normal  1 
 
 
-
 
NC_012917  PC1_3549  phosphotransferase system lactose/cellobiose-specific IIB subunit  32.22 
 
 		 95 aa  56.2  0.0000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0171  phosphotransferase system lactose/cellobiose- specific IIB subunit  39.29 
 
 		 94 aa  53.5  0.0000009  Atopobium parvulum DSM 20469  Bacteria  normal  0.430565  normal  1 
 
 
-
 
NC_011149  SeAg_B2484  phosphotransferase system, lactose/cellobiose-specific IIB subunit  32.97 
 
 		 90 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000665706  n/a   
 
 
-
 
NC_011094  SeSA_A2572  phosphotransferase system, lactose/cellobiose-specific IIB subunit  32.97 
 
 		 90 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0697836  normal  0.670538 
 
 
-
 
NC_011083  SeHA_C2584  PTS system lactose/cellobiose-specific IIB subunit  32.97 
 
 		 90 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.267294  normal  1 
 
 
-
 
NC_011080  SNSL254_A2529  PTS system lactose/cellobiose-specific transporter subunit IIB  32.97 
 
 		 90 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0712535  normal  0.400159 
 
 
-
 
NC_011205  SeD_A2692  PTS system lactose/cellobiose-specific IIB subunit  32.97 
 
 		 90 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.621712 
 
 
-
 
NC_007633  MCAP_0590  PTS system ascorbate-specific transporter subunits IICB  28.72 
 
 		 602 aa  52.4  0.000002  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_2257  phosphotransferase system lactose/cellobiose-specific IIB subunit  27.96 
 
 		 104 aa  50.8  0.000006  Serratia proteamaculans 568  Bacteria  normal  0.74172  hitchhiker  0.0000885847 
 
 
-
 
NC_009436  Ent638_2845  phosphotransferase system, lactose/cellobiose-specific IIB subunit  31.82 
 
 		 90 aa  49.3  0.00002  Enterobacter sp. 638  Bacteria  hitchhiker  0.0026966  normal  0.681011 
 
 
-
 
NC_011313  VSAL_II0823  PTS system, lactose/cellobiose specific IIB subunit  30.23 
 
 		 89 aa  48.9  0.00003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.479852  n/a   
 
 
-
 
NC_009632  SaurJH1_0389  phosphotransferase system lactose/cellobiose-specific IIB subunit  34.78 
 
 		 94 aa  48.1  0.00004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_0379  phosphotransferase system, lactose/cellobiose-specific IIB subunit  34.78 
 
 		 94 aa  48.1  0.00004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_3189  phosphotransferase system lactose/cellobiose- specific IIB subunit  30.34 
 
 		 90 aa  47.4  0.00006  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.728848  n/a   
 
 
-
 
NC_010320  Teth514_0239  phosphotransferase system, lactose/cellobiose-specific IIB subunit  28.89 
 
 		 99 aa  46.6  0.0001  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_2010  phosphotransferase system lactose/cellobiose-specific IIB subunit  32.56 
 
 		 89 aa  46.6  0.0001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000312148  n/a   
 
 
-
 
NC_013421  Pecwa_2251  phosphotransferase system lactose/cellobiose-specific IIB subunit  27.17 
 
 		 97 aa  46.6  0.0001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.470891  n/a   
 
 
-
 
NC_008262  CPR_0490  penitol PTS system enzyem IIB component  29.27 
 
 		 90 aa  45.8  0.0002  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_0502  PTS system, lactose/cellobiose-specific IIB component  30.49 
 
 		 90 aa  45.8  0.0002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.191208  n/a   
 
 
-
 
NC_009456  VC0395_0196  PTS system, mannitol-specific IIABC component  35.96 
 
 		 649 aa  45.4  0.0003  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_3367  phosphotransferase system lactose/cellobiose- specific IIB subunit  30 
 
 		 89 aa  43.9  0.0007  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_2490  phosphotransferase system lactose/cellobiose- specific IIB subunit  29.49 
 
 		 89 aa  43.1  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.206391  n/a   
 
 
-
 
NC_006274  BCZK2663  sugar phosphotransferase component II B  31.4 
 
 		 89 aa  43.1  0.001  Bacillus cereus E33L  Bacteria  normal  0.168546  n/a   
 
 
-
 
NC_003909  BCE_2982  PTS system, lactose/cellobiose specific IIB subunit  32.56 
 
 		 89 aa  43.5  0.001  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000466045  n/a   
 
 
-
 
NC_012917  PC1_1955  phosphotransferase system lactose/cellobiose-specific IIB subunit  27.66 
 
 		 97 aa  42  0.003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.876388  n/a   
 
 
-
 
NC_013456  VEA_001632  phosphotransferase system mannitol-specific  33.7 
 
 		 650 aa  41.2  0.005  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00834  PTS system, mannitol-specific II ABC component  33.7 
 
 		 650 aa  41.2  0.005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_0123  phosphotransferase system lactose/cellobiose- specific IIB subunit  28.26 
 
 		 94 aa  40.4  0.008  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
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