Gene VC0395_0196 details

Gene Information

• Locus tag: VC0395_0196
• Symbol: mtlA
• ID: 5134397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: -
• Start bp: 228219
• End bp: 230168
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640530519
• Product: PTS system, mannitol-specific IIABC component
• Protein accession: YP_001215037
• Protein GI: 147671594
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2213] Phosphotransferase system, mannitol-specific IIBC component; [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain
• TIGRFAM ID: [TIGR00851] PTS system, mannitol-specific IIC component

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATCAT CAGACGCCAA GGTCAAGATA CAAAATTTTG GCCGTTTCTT ATCAAACATG 
GTTATGCCGA ATATTGGCGC TTTTATTGCG TGGGGCTTTA TTACTGCGCT TTTTATTCCA 
ACAGGCTGGG TACCCAATGA GACGTTAGCC TCTTTGGTTG GGCCTATGAT TACCTACTTA 
TTGCCACTGT TGATCGGTTA TACCGGCGGT AAACTGGCAG GTGGCGAGCG CGGTGCGGTA 
GTGGGTGCCA TCACCACGAT GGGCGTGATT GTCGGTACCG ACATTCCCAT GTTCATGGGC 
GCGATGATCG TCGGTCCTAT GGGTGGCTGG GCAATTAAGG CGTTCGATAA AAAAATCGAT 
GGTAAAGTGC GCAGTGGCTT TGAAATGTTG GTCAACAATT TTTCTGCCGG CATTATCGGT 
ATGCTATGTG CCATCATCGC TTTCTTCCTG ATCGGCCCAT TTGTGAAAGT GCTGTCAGGC 
GCATTAGCGG CTGGAGTTAA CTTCCTCGTG ACCGCTCACC TACTCCCTCT GACGTCCATT 
TTTGTTGAGC CAGCCAAAAT TTTGTTCCTC AACAACGCGA TTAACCACGG TATTTTCTCA 
CCGCTGGGCA TTCAGCAAGC CAGTGAAACA GGTCAATCTA TTTTCTTCTT AATTGAGGCC 
AACCCAGGTC CTGGCCTTGG TATTTTGCTG GCGTACATGG TGTTTGGTAA GGGGACAGCT 
CGCCAAACCG CGGGTGGCGC GACCATCATT CACTTCTTTG GTGGTATTCA CGAAATCTAT 
TTCCCTTACA TCCTAATGAA TCCACGCCTG ATTTTGGCGG CGATTGCGGG CGGTATGACC 
GGTGTGTTTA CGCTCACCGT ATTTAATGCT GGTCTGGTAT CTCCAGCATC TCCGGGCTCT 
ATTTTCGCGG TACTGCTGAT GACTAATAAG GGCTCAATCT TAGGTGTAGT GTGTTCCATC 
TTTGCAGCGG CAGCGGTTTC TTTTACCGTC GCAGCGCTAC TGATGAAAGC ACAAACTTCA 
ACCGAGCAAG ATGGCGATAA AGACGCGTTG GTGAAAGCCA CCTCGATAAT GCAAGAGATG 
AAAGCGGGTT CAAAAGGTCA AGCGGCACCG ACGGCGACCC AAAGCAAAAA AATCGACATG 
GCGAATGTAC AAAGCATTAT TGTCGCTTGT GATGCGGGTA TGGGCTCTAG TGCCATGGGT 
GCCAGCATGC TACGTAAAAA AATTCAGGAA GTCGGTTTGC CCGTTACGGT AACGAATATG 
GCCATCAACT CACTCCCTGC TCATGTGGAT ATGGTGATCA CCCACCAAGA TTTGACGGAC 
CGTGCACGTC AACACGCGCC GAATGCCGAG CATATTTCAC TCAATAATTT CCTAGATAGC 
GCGTTGTACA ACCAGTTAGT GACTCAACTT CTGGCCGCAA AGCGCCAAGC GGCCAATGAT 
AGTCAGCTGA TCAAGCCTTC GATTTTGGCC GCTAACGATG ACCGCTATGA AGTACAGCAG 
CCAAGCGTAT TCCAACTGCA AAAGGAGAAC ATTCACCTTG GCCTGAACGC CAAAAATAAA 
GAGGAGGCGA TTCGCTTCGC GGGTAATAAA CTAGTTGAAC TGGGTTACGT CCACCCAGAG 
TACGTCGATG CCATGTTCGA GCGTGAAAAG CTGGTTTCAA CCTACCTTGG TGAGTCCATT 
GCCGTACCGC ACGGTACTGT GGATGCCAAA GATCGCGTGA TTAAAACCGG CATTGTGATT 
TGCCAATACC CACAAGGCGT CGCTTTTAGT GAAGACAGCG GCGATGTCGC CAAACTCGTG 
ATTGGTATCG CTGCCAAGAA TGATGAACAT ATTCAAGTCA TTACCACCAT TACCAATGCC 
CTCGATGACC CAAATGCTAT CGATAAACTC ACCTCCACCA AGGATGTGAG TGATGTATTG 
AGCATTTTGG CCACCAGCCA AGCGGCATAA 

 

Protein sequence

MISSDAKVKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWVPNETLA SLVGPMITYL 
LPLLIGYTGG KLAGGERGAV VGAITTMGVI VGTDIPMFMG AMIVGPMGGW AIKAFDKKID 
GKVRSGFEML VNNFSAGIIG MLCAIIAFFL IGPFVKVLSG ALAAGVNFLV TAHLLPLTSI 
FVEPAKILFL NNAINHGIFS PLGIQQASET GQSIFFLIEA NPGPGLGILL AYMVFGKGTA 
RQTAGGATII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFTLTVFNA GLVSPASPGS 
IFAVLLMTNK GSILGVVCSI FAAAAVSFTV AALLMKAQTS TEQDGDKDAL VKATSIMQEM 
KAGSKGQAAP TATQSKKIDM ANVQSIIVAC DAGMGSSAMG ASMLRKKIQE VGLPVTVTNM 
AINSLPAHVD MVITHQDLTD RARQHAPNAE HISLNNFLDS ALYNQLVTQL LAAKRQAAND 
SQLIKPSILA ANDDRYEVQQ PSVFQLQKEN IHLGLNAKNK EEAIRFAGNK LVELGYVHPE 
YVDAMFEREK LVSTYLGESI AVPHGTVDAK DRVIKTGIVI CQYPQGVAFS EDSGDVAKLV 
IGIAAKNDEH IQVITTITNA LDDPNAIDKL TSTKDVSDVL SILATSQAA