42 homologs were found in PanDaTox collection
for query gene Apar_1208 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013203  Apar_1208  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 307 aa  609  1e-173  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_1475  C4-dicarboxylate transporter/malic acid transport protein  38.38 
 
 		 308 aa  198  9e-50  Clostridium phytofermentans ISDg  Bacteria  normal  0.687324  n/a   
 
 
-
 
NC_013204  Elen_0220  C4-dicarboxylate transporter/malic acid transport protein  41.34 
 
 		 329 aa  158  1e-37  Eggerthella lenta DSM 2243  Bacteria  normal  0.698092  normal  1 
 
 
-
 
NC_008506  LACR_D35  tellurite resistance protein related permease  31.91 
 
 		 323 aa  133  5e-30  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0741739  n/a   
 
 
-
 
NC_008700  Sama_1504  hypothetical protein  30.69 
 
 		 336 aa  125  1e-27  Shewanella amazonensis SB2B  Bacteria  normal  0.34521  normal  1 
 
 
-
 
NC_009831  Ssed_1717  C4-dicarboxylate transporter/malic acid transport protein  28.12 
 
 		 322 aa  124  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.0000810038 
 
 
-
 
NC_009052  Sbal_2665  C4-dicarboxylate transporter/malic acid transport protein  30 
 
 		 332 aa  122  9.999999999999999e-27  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1697  C4-dicarboxylate transporter/malic acid transport protein  30 
 
 		 332 aa  120  3e-26  Shewanella baltica OS223  Bacteria  normal  0.536393  hitchhiker  0.000152947 
 
 
-
 
NC_009783  VIBHAR_03304  hypothetical protein  29.45 
 
 		 324 aa  120  3e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2687  C4-dicarboxylate transporter/malic acid transport protein  30 
 
 		 332 aa  120  3e-26  Shewanella baltica OS185  Bacteria  normal  0.123467  n/a   
 
 
-
 
NC_010506  Swoo_2874  C4-dicarboxylate transporter/malic acid transport protein  26.86 
 
 		 322 aa  119  4.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0144876 
 
 
-
 
NC_009997  Sbal195_2766  C4-dicarboxylate transporter/malic acid transport protein  30.39 
 
 		 332 aa  119  6e-26  Shewanella baltica OS195  Bacteria  normal  1  normal  0.0195102 
 
 
-
 
NC_009438  Sputcn32_2372  C4-dicarboxylate transporter/malic acid transport protein  30.79 
 
 		 334 aa  118  9.999999999999999e-26  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0424  tellurite resistance protein related permease  34.06 
 
 		 280 aa  117  3e-25  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0104982  n/a   
 
 
-
 
NC_008577  Shewana3_1559  C4-dicarboxylate transporter/malic acid transport protein  30.46 
 
 		 329 aa  115  6e-25  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.239872 
 
 
-
 
NC_013456  VEA_002682  tellurite resistance protein  28.8 
 
 		 324 aa  115  7.999999999999999e-25  Vibrio sp. Ex25  Bacteria  normal  0.0518365  n/a   
 
 
-
 
NC_011312  VSAL_I0679  putative C4-dicarboxylate/malic acid transport protein  30.63 
 
 		 329 aa  115  1.0000000000000001e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0950356  n/a   
 
 
-
 
NC_008322  Shewmr7_1565  C4-dicarboxylate transporter/malic acid transport protein  29.8 
 
 		 329 aa  114  2.0000000000000002e-24  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0625081 
 
 
-
 
NC_008321  Shewmr4_1498  C4-dicarboxylate transporter/malic acid transport protein  29.47 
 
 		 329 aa  114  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00475764 
 
 
-
 
NC_004347  SO_2906  hypothetical protein  28.81 
 
 		 332 aa  112  7.000000000000001e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1906  hypothetical protein  27.24 
 
 		 322 aa  107  2e-22  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_2530  C4-dicarboxylate transporter/malic acid transport protein  28.92 
 
 		 323 aa  105  9e-22  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004116  SAG1215  hypothetical protein  30.74 
 
 		 305 aa  104  1e-21  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00293385  n/a   
 
 
-
 
NC_009901  Spea_1679  C4-dicarboxylate transporter/malic acid transport protein  29.17 
 
 		 330 aa  104  2e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0920499  n/a   
 
 
-
 
NC_008345  Sfri_0784  C4-dicarboxylate transporter/malic acid transport protein  27.72 
 
 		 322 aa  104  2e-21  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_0123  C4-dicarboxylate transporter  28 
 
 		 338 aa  95.1  1e-18  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_1960  C4-dicarboxylate transporter/malic acid transport protein  26.86 
 
 		 313 aa  91.3  2e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_0126  C4-dicarboxylate transporter family protein  27.27 
 
 		 338 aa  89.7  5e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  0.307461  n/a   
 
 
-
 
NC_009784  VIBHAR_06234  hypothetical protein  28.92 
 
 		 299 aa  87  4e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000479  tellurite resistance protein  27.31 
 
 		 315 aa  82  0.00000000000001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1256  C4-dicarboxylate transporter/malic acid transport protein  28.31 
 
 		 315 aa  72  0.00000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.816232  n/a   
 
 
-
 
NC_009487  SaurJH9_1231  C4-dicarboxylate transporter/malic acid transport protein  28.31 
 
 		 315 aa  72  0.00000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  23.32 
 
 		 341 aa  62  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  25.5 
 
 		 323 aa  54.3  0.000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  21.2 
 
 		 322 aa  51.6  0.00002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0699  exfoliative exotoxin B, putative  28.44 
 
 		 295 aa  50.1  0.00004  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0457  hypothetical protein  27.08 
 
 		 210 aa  48.9  0.0001  Vibrio cholerae O395  Bacteria  normal  0.5799  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  24.56 
 
 		 326 aa  47  0.0004  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  24.73 
 
 		 326 aa  45.8  0.0008  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  21.63 
 
 		 357 aa  45.1  0.002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  25.35 
 
 		 321 aa  43.5  0.004  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  26.58 
 
 		 329 aa  43.1  0.005  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
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