25 homologs were found in PanDaTox collection
for query gene Amir_5372 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_5372  transcriptional regulator, PadR-like family  100 
 
 		 100 aa  196  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5040  PadR-like family transcriptional regulator  59.14 
 
 		 113 aa  114  3e-25  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.194337 
 
 
-
 
NC_013947  Snas_1476  transcriptional regulator, PadR-like family  46.24 
 
 		 109 aa  87.4  7e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1666  transcriptional regulator, PadR-like family  48.24 
 
 		 109 aa  86.3  1e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.345616 
 
 
-
 
NC_013947  Snas_3569  transcriptional regulator, PadR-like family  47.06 
 
 		 109 aa  85.9  2e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3490  transcriptional regulator, PadR-like family  44.58 
 
 		 108 aa  77.4  0.00000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.250706 
 
 
-
 
NC_011004  Rpal_2803  transcriptional regulator, PadR-like family  44.58 
 
 		 101 aa  75.1  0.0000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3190  transcriptional regulator, PadR-like family  37.86 
 
 		 107 aa  53.5  0.000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0392978  normal  0.0453755 
 
 
-
 
NC_008009  Acid345_1284  PadR family transcriptional regulator  37.66 
 
 		 121 aa  45.1  0.0003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.865226  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_4516  PadR-like family transcriptional regulator  30.14 
 
 		 114 aa  44.7  0.0004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4418  PadR family transcriptional regulator  30.14 
 
 		 114 aa  44.7  0.0005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4828  30S ribosomal protein S14 homolog-related  30.14 
 
 		 114 aa  44.7  0.0005  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4436  PadR family transcriptional regulator  30.14 
 
 		 122 aa  44.3  0.0006  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2059  PadR family transcriptional regulator  36.36 
 
 		 127 aa  43.5  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013926  Aboo_0595  transcriptional regulator, PadR-like family  35.9 
 
 		 112 aa  42.4  0.002  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2348  PadR family transcriptional regulator  34.41 
 
 		 119 aa  42.4  0.002  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.14892 
 
 
-
 
NC_013730  Slin_2308  transcriptional regulator, PadR-like family  33.73 
 
 		 124 aa  41.6  0.003  Spirosoma linguale DSM 74  Bacteria  normal  1  hitchhiker  0.00197276 
 
 
-
 
NC_008009  Acid345_3563  PadR family transcriptional regulator  42.59 
 
 		 125 aa  42  0.003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0909  transcriptional regulator, PadR-like family  37.5 
 
 		 114 aa  41.6  0.003  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0735  PadR-like family transcriptional regulator  40.45 
 
 		 111 aa  41.6  0.004  Thermobispora bispora DSM 43833  Bacteria  normal  1  hitchhiker  0.0073319 
 
 
-
 
NC_013521  Sked_33800  transcriptional regulator, PadR family  40 
 
 		 126 aa  40.8  0.006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.377597  normal  1 
 
 
-
 
NC_013730  Slin_3822  transcriptional regulator, PadR-like family  36.59 
 
 		 114 aa  40.8  0.006  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5742  transcriptional regulator, PadR-like family  34.62 
 
 		 112 aa  40.8  0.006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.92312  normal  1 
 
 
-
 
NC_010338  Caul_4325  PadR-like family transcriptional regulator  35.06 
 
 		 109 aa  40.8  0.007  Caulobacter sp. K31  Bacteria  normal  0.405564  normal  1 
 
 
-
 
NC_011773  BCAH820_4803  transcriptional regulator, PadR family  35.56 
 
 		 86 aa  40.4  0.008  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>