| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2308 |
|---|
| Symbol | |
|---|
| ID | 8726051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2787949 |
|---|
| End bp | 2788323 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003387128 |
|---|
| Protein GI | 284037198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00197276 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGGTA CGCTCAAAAC AATCATACTG AAGCTTTTGG CGGAGCCGAG GCCATCCACT
CCTTCGCAGG TTGGTGCAGG TCCGTCAGTA CCGGGCCGGA TGTATGGCTA TGAGATTACC
CAGTTGGTTA AAGAACGCAC CCAGGGCCAG ATTGCGCTGT CATTTGGGGC TTTGTATCCT
GTCCTGCATA AGCTGGAACA GGAGGGATTA CTGATAACGG AAACGGAAGA AGTTGAAGGT
CGACTACGTA AGTATTACTC GTTGACCCCG CAGGGCAATG AGGCTGCGGT TCAAAAAGTC
TCCGATTTTG AACGATTTAT GGAAACAATG CGCCAGCTTC TGCAACTACC CATGCAACTA
GCCCCAAGCC ATTAA
|
|---|
| Protein sequence | MRGTLKTIIL KLLAEPRPST PSQVGAGPSV PGRMYGYEIT QLVKERTQGQ IALSFGALYP
VLHKLEQEGL LITETEEVEG RLRKYYSLTP QGNEAAVQKV SDFERFMETM RQLLQLPMQL
APSH
|
|---|
| |