More than 300 homologs were found in PanDaTox collection
for query gene Lreu_0535 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  100 
 
 		 147 aa  300  3.0000000000000004e-81  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  66.67 
 
 		 144 aa  210  3.9999999999999995e-54  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  65.73 
 
 		 143 aa  205  2e-52  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  68.84 
 
 		 139 aa  197  3e-50  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  68.89 
 
 		 136 aa  192  9e-49  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  56.52 
 
 		 143 aa  158  3e-38  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  55.47 
 
 		 137 aa  156  8e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  54.74 
 
 		 138 aa  156  1e-37  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  55.88 
 
 		 142 aa  152  2e-36  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  54.41 
 
 		 142 aa  150  7e-36  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  54.41 
 
 		 142 aa  150  7e-36  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  52.9 
 
 		 137 aa  148  2e-35  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  52.52 
 
 		 137 aa  148  3e-35  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  1.0000000000000001e-34  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  2.0000000000000003e-34  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  52.55 
 
 		 137 aa  145  3e-34  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  51.45 
 
 		 137 aa  140  8e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  51.45 
 
 		 137 aa  140  8e-33  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  50.71 
 
 		 140 aa  139  9.999999999999999e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  50.36 
 
 		 138 aa  138  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  51.45 
 
 		 143 aa  134  3.0000000000000003e-31  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  48.61 
 
 		 139 aa  129  1.0000000000000001e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  45.45 
 
 		 141 aa  128  2.0000000000000002e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  46.1 
 
 		 137 aa  127  4.0000000000000003e-29  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  46.76 
 
 		 139 aa  124  5e-28  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  45.99 
 
 		 141 aa  122  2e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  46.38 
 
 		 150 aa  120  6e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  44.37 
 
 		 163 aa  120  7e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal  1 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  44.53 
 
 		 142 aa  119  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  44.37 
 
 		 140 aa  118  3e-26  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  43.57 
 
 		 145 aa  117  3.9999999999999996e-26  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal  1 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  44.2 
 
 		 157 aa  114  3e-25  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  42.03 
 
 		 139 aa  114  3.9999999999999997e-25  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  44.83 
 
 		 141 aa  110  8.000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  40.58 
 
 		 142 aa  109  1.0000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  44.93 
 
 		 168 aa  108  2.0000000000000002e-23  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  42.03 
 
 		 160 aa  108  3e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  41.55 
 
 		 160 aa  107  4.0000000000000004e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.0446184 
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  47.79 
 
 		 165 aa  107  8.000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.22726 
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  41.18 
 
 		 160 aa  105  2e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  42.65 
 
 		 158 aa  105  2e-22  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  41.18 
 
 		 160 aa  104  4e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  42.25 
 
 		 161 aa  104  4e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  41.18 
 
 		 160 aa  104  4e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  40.29 
 
 		 146 aa  104  5e-22  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  42.25 
 
 		 158 aa  102  1e-21  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  42.75 
 
 		 163 aa  103  1e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_012850  Rleg_1714  Holliday junction resolvase-like protein  44.2 
 
 		 164 aa  103  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.396791 
 
 
-
 
NC_011369  Rleg2_1518  Holliday junction resolvase-like protein  44.2 
 
 		 163 aa  102  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.793177 
 
 
-
 
NC_011004  Rpal_3523  Holliday junction resolvase-like protein  42.86 
 
 		 160 aa  101  3e-21  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00889049  n/a   
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  40.14 
 
 		 176 aa  101  4e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_2255  Holliday junction resolvase-like protein  44.12 
 
 		 163 aa  100  6e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.86844  normal  0.55099 
 
 
-
 
NC_010338  Caul_1518  Holliday junction resolvase YqgF  39.71 
 
 		 164 aa  100  7e-21  Caulobacter sp. K31  Bacteria  normal  1  normal  0.470214 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  39.86 
 
 		 182 aa  100  8e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_008254  Meso_1361  Holliday junction resolvase YqgF  41.61 
 
 		 160 aa  98.6  2e-20  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3178  Holliday junction resolvase YqgF  38.24 
 
 		 161 aa  98.2  4e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.825708  n/a   
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  40.58 
 
 		 170 aa  97.1  6e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  38.52 
 
 		 188 aa  94.4  5e-19  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_010581  Bind_1895  Holliday junction resolvase-like protein  40.88 
 
 		 165 aa  94.4  5e-19  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.273411  normal  1 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  39.13 
 
 		 163 aa  93.6  9e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  41.26 
 
 		 165 aa  93.2  1e-18  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal  1 
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  39.13 
 
 		 168 aa  92.8  1e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  40.69 
 
 		 160 aa  93.2  1e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_009668  Oant_3664  Holliday junction resolvase-like protein  42.45 
 
 		 165 aa  93.2  1e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  39.33 
 
 		 165 aa  93.2  1e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.724014 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  38.41 
 
 		 146 aa  92.8  1e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_004311  BRA0597  Holliday junction resolvase-like protein  43.07 
 
 		 162 aa  92.4  2e-18  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  37.76 
 
 		 161 aa  92.4  2e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  39.57 
 
 		 139 aa  91.7  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  42.03 
 
 		 151 aa  90.9  5e-18  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  39.55 
 
 		 202 aa  90.9  6e-18  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_009504  BOV_A0563  Holliday junction resolvase-like protein  42.34 
 
 		 162 aa  90.5  7e-18  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  38.24 
 
 		 169 aa  90.1  9e-18  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  38.24 
 
 		 169 aa  90.1  9e-18  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  37.68 
 
 		 145 aa  89.4  1e-17  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  38.97 
 
 		 141 aa  90.1  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  36.96 
 
 		 175 aa  89.7  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  37.5 
 
 		 169 aa  88.6  2e-17  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_008048  Sala_0925  Holliday junction resolvase YqgF  35 
 
 		 152 aa  89.4  2e-17  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal  1 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  36.62 
 
 		 138 aa  88.2  3e-17  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  30.94 
 
 		 153 aa  87.8  4e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008783  BARBAKC583_0838  hypothetical protein  38.41 
 
 		 161 aa  87.8  5e-17  Bartonella bacilliformis KC583  Bacteria  normal  0.115372  n/a   
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  35.04 
 
 		 137 aa  87.8  5e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00000789262 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  36.69 
 
 		 142 aa  87.4  6e-17  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  38.85 
 
 		 143 aa  87  8e-17  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  36.03 
 
 		 222 aa  87  8e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  32.33 
 
 		 144 aa  86.7  1e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  34.31 
 
 		 141 aa  85.9  2e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  37.04 
 
 		 141 aa  84.7  3e-16  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  37.5 
 
 		 143 aa  85.1  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  36.17 
 
 		 151 aa  84.7  4e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  35.29 
 
 		 137 aa  84.3  5e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  35.07 
 
 		 163 aa  84  7e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_009511  Swit_0601  Holliday junction resolvase YqgF  35.97 
 
 		 151 aa  83.6  8e-16  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.613999 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  35.77 
 
 		 163 aa  83.6  9e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>