16 homologs were found in PanDaTox collection
for query gene Xaut_5087 on replicon NC_009717
Organism: Xanthobacter autotrophicus Py2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009717  Xaut_5087  type IV secretory pathway VirB3 family protein  100 
 
 		 112 aa  228  2e-59  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008242  Meso_4347  type IV secretory pathway, VirB3-like  78.57 
 
 		 112 aa  196  6e-50  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0676  type IV secretory pathway VirB3 family protein  77.36 
 
 		 113 aa  184  4e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009475  BBta_p0256  Type IV secretory pathway AvhB3 protein  62.5 
 
 		 112 aa  157  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.990445 
 
 
-
 
NC_009432  Rsph17025_4377  type IV secretory pathway, VirB3 family protein  43.14 
 
 		 109 aa  88.2  3e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009508  Swit_5008  type IV secretory pathway, VirB3 family protein  38.95 
 
 		 111 aa  68.2  0.00000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.118647  normal  0.169253 
 
 
-
 
NC_011982  Avi_8225  type IV secretion system protein VirB3  35.16 
 
 		 108 aa  62.4  0.000000002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5815  type IV secretory pathway VirB3 family protein  32.04 
 
 		 122 aa  56.6  0.0000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_6160  type IV secretion system protein VirB3  30.3 
 
 		 108 aa  55.8  0.0000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0419934  normal  1 
 
 
-
 
NC_010681  Bphyt_0162  type IV secretory pathway VirB3 family protein  32.35 
 
 		 110 aa  47.4  0.00007  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010509  Mrad2831_6324  type IV secretory pathway VirB3 family protein  30.84 
 
 		 113 aa  45.4  0.0002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  1 
 
 
-
 
NC_004311  BRA0067  type IV secretion system protein VirB3  28.44 
 
 		 116 aa  45.1  0.0003  Brucella suis 1330  Bacteria  decreased coverage  0.00447561  n/a   
 
 
-
 
NC_009504  BOV_A0061  type IV secretion system protein VirB3  28.44 
 
 		 128 aa  45.4  0.0003  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_007953  Bxe_C0449  putative type IV secretion system protein VirB3/TraD  24.77 
 
 		 110 aa  43.9  0.0008  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009469  Acry_3522  type IV secretion system protein VirB3  28.97 
 
 		 110 aa  43.5  0.001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1755  putative type IV secretion system protein VirB3/TraD  27.72 
 
 		 106 aa  42.7  0.002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.958773 
 
 
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