Gene Xaut_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_5087 
Symbol 
ID5420477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp309311 
End bp309649 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content62% 
IMG OID640873741 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_001409521 
Protein GI154243948 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3702] Type IV secretory pathway, VirB3 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA GCGTGGCGCT TGAGGAGGAC ACGCTGTTCC TGGCCTGCAC GCGGCCGGCC 
ATGGTCGCCG GCGTGACGAT GGAGGCCATG GGCATCAACG TCATCCTGAC GACGATCCTC
TATATCCTTG CGGGCTCGAT CGCCTACGCC CTTGTCGGCT TCGTCTTCCA TCTCGTCTTC
AAGACGCTGG TGAAGCATGA CCACAACATG TTTCGCGTCT TGATGGCGTG GATCGAAACT
CGCGGCCGGT CGCGCAACGG GGCCTTCTGG GGCGGCACCA CGCTGACCCC CCTCAAGCTC
GTGAGGCGCT ACGACGAAAG AGACCTTGGC CTTGCCTAA
 
Protein sequence
MAKSVALEED TLFLACTRPA MVAGVTMEAM GINVILTTIL YILAGSIAYA LVGFVFHLVF 
KTLVKHDHNM FRVLMAWIET RGRSRNGAFW GGTTLTPLKL VRRYDERDLG LA