10 homologs were found in PanDaTox collection
for query gene Vapar_5672 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5672  hypothetical protein  100 
 
 		 133 aa  269  8.000000000000001e-72  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_3072  hypothetical protein  75.19 
 
 		 130 aa  194  3e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.49462  n/a   
 
 
-
 
NC_010511  M446_5365  hypothetical protein  43.4 
 
 		 289 aa  72.8  0.000000000002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.124702 
 
 
-
 
NC_011894  Mnod_6077  hypothetical protein  41.51 
 
 		 293 aa  63.5  0.0000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_3907  hypothetical protein  33.93 
 
 		 290 aa  61.2  0.000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_2374  hypothetical protein  33.33 
 
 		 289 aa  55.1  0.0000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_4388  hypothetical protein  35.71 
 
 		 285 aa  53.5  0.000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.112104  normal  0.0499819 
 
 
-
 
NC_009636  Smed_1436  hypothetical protein  29.91 
 
 		 284 aa  47.8  0.00005  Sinorhizobium medicae WSM419  Bacteria  normal  0.878588  hitchhiker  0.0000170273 
 
 
-
 
NC_008254  Meso_3612  hypothetical protein  29.46 
 
 		 297 aa  41.6  0.003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3647  hypothetical protein  28.21 
 
 		 295 aa  41.2  0.005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.149375 
 
 
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