10 homologs were found in PanDaTox collection
for query gene Tcr_0983 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_0983  hypothetical protein  100 
 
 
99 aa  196  1.0000000000000001e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0452  putative anti-anti-sigma factor  30.59 
 
 
100 aa  45.8  0.0002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0606923  n/a   
 
 
-
 
NC_010159  YpAngola_A1142  putative anti-anti-sigma factor  30.59 
 
 
100 aa  45.8  0.0002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0516  putative anti-sigma B factor antagonist  30.59 
 
 
100 aa  45.8  0.0002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.144727  n/a   
 
 
-
 
NC_008321  Shewmr4_0683  SpoIIAA family protein  28.4 
 
 
94 aa  43.5  0.0009  Shewanella sp. MR-4  Bacteria  normal  normal  0.575591 
 
 
-
 
NC_008322  Shewmr7_3339  SpoIIAA family protein  28.4 
 
 
94 aa  43.5  0.001  Shewanella sp. MR-7  Bacteria  normal  normal  0.435913 
 
 
-
 
NC_009832  Spro_4356  anti-sigma-factor antagonist  29.41 
 
 
99 aa  42.4  0.002  Serratia proteamaculans 568  Bacteria  normal  0.36645  normal  0.0117925 
 
 
-
 
NC_012917  PC1_0285  hypothetical protein  30.95 
 
 
98 aa  42  0.002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3804  anti-sigma-factor antagonist  29.11 
 
 
97 aa  41.2  0.005  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.002729  n/a   
 
 
-
 
NC_007614  Nmul_A2745  anti-sigma-factor antagonist domain-containing protein  32.53 
 
 
96 aa  40.4  0.009  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
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