Gene Shewmr7_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3339 
Symbol 
ID4255752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3956029 
End bp3956313 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content48% 
IMG OID638124021 
ProductSpoIIAA family protein 
Protein accessionYP_739378 
Protein GI114048828 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.435913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAAT TTGTGCAACA GGGTAACATT TGCCACCTAA AAGGGCGTTT ATCACAGGAG 
CAAGTGGTCG CTCTATGGCC GCAAAGGCAA AGCCTGTTAA GCCAAGAAAC CCAAATCTTG
TCGCTCACCG AGCTGGAGTA CAGCGATAGT GCTGGTGTGG CATTTTTGCT GGCGTTAGTG
CGCCAGCATG GCACGCCGCT GAAGTTGTGC TCAGCGTCGG ATCAGCTAAA AAAATTAATC
GATTTATATG ATTTACAGTC CTTCTTCACC GAAGAAGCGA ATTGA
 
Protein sequence
MVEFVQQGNI CHLKGRLSQE QVVALWPQRQ SLLSQETQIL SLTELEYSDS AGVAFLLALV 
RQHGTPLKLC SASDQLKKLI DLYDLQSFFT EEAN