Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3339 |
Symbol | |
ID | 4255752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3956029 |
End bp | 3956313 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124021 |
Product | SpoIIAA family protein |
Protein accession | YP_739378 |
Protein GI | 114048828 |
COG category | [R] General function prediction only |
COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.435913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTGAAT TTGTGCAACA GGGTAACATT TGCCACCTAA AAGGGCGTTT ATCACAGGAG CAAGTGGTCG CTCTATGGCC GCAAAGGCAA AGCCTGTTAA GCCAAGAAAC CCAAATCTTG TCGCTCACCG AGCTGGAGTA CAGCGATAGT GCTGGTGTGG CATTTTTGCT GGCGTTAGTG CGCCAGCATG GCACGCCGCT GAAGTTGTGC TCAGCGTCGG ATCAGCTAAA AAAATTAATC GATTTATATG ATTTACAGTC CTTCTTCACC GAAGAAGCGA ATTGA
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Protein sequence | MVEFVQQGNI CHLKGRLSQE QVVALWPQRQ SLLSQETQIL SLTELEYSDS AGVAFLLALV RQHGTPLKLC SASDQLKKLI DLYDLQSFFT EEAN
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