14 homologs were found in PanDaTox collection
for query gene Syncc9902_2034 on replicon NC_007513
Organism: Synechococcus sp. CC9902



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_2034  TPR repeat-containing protein  100 
 
 
605 aa  1247    Synechococcus sp. CC9902  Bacteria  normal  0.651462  n/a   
 
 
-
 
NC_009007  RSP_3924  hypothetical protein  33.5 
 
 
229 aa  86.3  0.000000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009040  Rsph17029_4093  hypothetical protein  30.26 
 
 
229 aa  78.6  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.968365  normal  0.786731 
 
 
-
 
NC_008312  Tery_2707  glycosyl transferase family protein  23.94 
 
 
1486 aa  52.4  0.00002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.228337 
 
 
-
 
NC_008312  Tery_4768  sulfotransferase  22.07 
 
 
676 aa  49.7  0.0001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.260339  normal  0.153237 
 
 
-
 
NC_013926  Aboo_0471  TPR repeat-containing protein  20.6 
 
 
1297 aa  46.6  0.001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008312  Tery_1492  glycosyl transferase family protein  23.56 
 
 
1737 aa  45.4  0.003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.315595  normal  0.552274 
 
 
-
 
NC_009485  BBta_6695  hypothetical protein  26.09 
 
 
360 aa  44.7  0.005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.915204 
 
 
-
 
NC_008312  Tery_1657  TPR repeat-containing protein  32.89 
 
 
594 aa  44.3  0.006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0658919  normal 
 
 
-
 
NC_009012  Cthe_0436  tetratricopeptide TPR_2  20.67 
 
 
1056 aa  44.7  0.006  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0774  tetratricopeptide TPR_2  23.48 
 
 
519 aa  43.9  0.008  Methanospirillum hungatei JF-1  Archaea  normal  0.169881  normal  0.452711 
 
 
-
 
NC_009523  RoseRS_4604  protein kinase  18.75 
 
 
545 aa  43.9  0.008  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0709  Tetratricopeptide TPR_2 repeat protein  23.73 
 
 
864 aa  43.9  0.008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.635546 
 
 
-
 
NC_009767  Rcas_0215  TPR repeat-containing protein  21.16 
 
 
2262 aa  43.9  0.009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0297822 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>