| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2034 |
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| Symbol | |
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| ID | 3742994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1941817 |
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| End bp | 1943634 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637772231 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_378035 |
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| Protein GI | 78185601 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3898] Uncharacterized membrane-bound protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.651462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAA CCAACCAACC ACTTCAAGCT CTCGAAGCTT CCATACAATT AGCCCGCCAA
AACTATAAAG AAGCGAAAAT CGACTCAGCC CTCCAACACA TCAAAGAAGG GCTACAGATT
GATGAGCACA ATGCCCAATT ACTCGAGATT GCTGCCAGCA CTCATCTTCG TTTCAATAAT
AACAATGAAG CCATTAAATA TGCTCAAGAA TTAATCACAC ACCATCCAAG AAATCCGCAT
GGATACAGCA GATACGCACA AGCCCTGCTG CAACAGAAAC AACCTTTTAA TGCCAATCAA
ATGGCACTTA GCGGATTACA AGAAGCTCCA CACAATCAAC AGCTCCTGGC ATTAACTAGC
GAATCTTATC AAGCGCTAGA GCGCTGGGAT CAATCACTAG AACTGGCAAA TCAACTTATT
GAATTCCATC CAAGCCTGCA CATGGGATAC CTCAAGGCAG CACAAAACCT TCTAAAACTC
AACAAACCCA ACGAGGCTTC TTCTATCGCA GAACGAGGCT TAAAAGCAAA GCCGAACCAC
CCTCATCTTC ATAGCATTGC CAGCGAAGCC TACCGAGCCA GACACCTACA CAATCACTCA
CTCAATCACG CAAAAGCCTT AATTGAAAAT CAACCAGACT CCATCGAAGG GCATAAACGA
GCAGCCCAAG ACTTACTGAA ACTAGGGCTA AGGAATGAGG CAATTTTAAT CATCGAGCAA
CTCATTCAAC GAAACAAGTC CAAGAAAGCC GCGGCAATGG CCAGCAAGCT CTTCAAAGTA
GCCGGACAAA CATCAAGAAG CCTCGTTCTT ACAACACAAC TCGCCAAAGC AAACGATGCA
ACAGATGATG ATCAACGGCA ATGGATTAGC AATTTATTCT CATGTAGACA GATTGATCTT
GCACTATCTA AAATTGAATG CAACAACCCA ATCGATGCAG AAATACAGAG CAATACTCTT
CGAGCTCTCC TCAGCCAACC ACTCAATACA TTTAAGAAAC TATCAAAGCA TGAGCGGAAC
TTAATCAGAG AATACGATAT CTATTATCAC CTATCTCTTC CTAACTTTAA TCCAACTCTG
GAAGATTTAG AACAACGGCT CAAATCCACC AACAAGATCA TCCTACTTGT GGTGCATGTT
GGGAAATGCG CAGGCGAATC AATCATCACC GCACTAGAAG AAACCTTCAC CTCAAACGAA
GTGGAAGTCA TCGAATATCA CACTTTTGAT AGCAATATGC TGATCAGAGA AAGTCTTCCA
TTGCTCCACA AGCATTCCGA TCGAATCCAC ATTGTGACTT GCACTCGCAA TCCTGTGGAT
CGCTGGATAT CTGCTTTCAA CTGGGACTAC CACACATTTT TCTTATCAAG CCAATTCTAT
TGTCCAGACC ACATCATTCA ATTACATCGC CAATACTTCT CCGCCCTAGA ATTAACCAAT
GGCTTGATGC GGAAGGAAAT AGAGGCCCAT GAATTGGCCA CATTCAAACA CCTTGCCTAT
GGACACATGG CGAAAGGAAT CTCCTGGTAC CTACCAGAAG AAATTATCGA CAATCTTCCT
AAGCAAGCAA TATCGACAAT CAATGTTGAA ACAATCCAAA ATGACTTCAA TCAATGCATT
CATACAATCA CAACAACTTT CAAACAAATA GGTAAACGGG AACCAACACC CATCCCAAAA
ACCAAGCAAA ATTATCAACA CTGGTACAAA TCAGGGGCAT TTAGTGCCGC CAGACAATTC
AGCGATGCAC AAAGACAGTT CCTCGAACAA TTCCTAAATG AAGATTACAA AGTAAACAAT
AAATTGAATA AGATTTAG
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| Protein sequence | MSSTNQPLQA LEASIQLARQ NYKEAKIDSA LQHIKEGLQI DEHNAQLLEI AASTHLRFNN
NNEAIKYAQE LITHHPRNPH GYSRYAQALL QQKQPFNANQ MALSGLQEAP HNQQLLALTS
ESYQALERWD QSLELANQLI EFHPSLHMGY LKAAQNLLKL NKPNEASSIA ERGLKAKPNH
PHLHSIASEA YRARHLHNHS LNHAKALIEN QPDSIEGHKR AAQDLLKLGL RNEAILIIEQ
LIQRNKSKKA AAMASKLFKV AGQTSRSLVL TTQLAKANDA TDDDQRQWIS NLFSCRQIDL
ALSKIECNNP IDAEIQSNTL RALLSQPLNT FKKLSKHERN LIREYDIYYH LSLPNFNPTL
EDLEQRLKST NKIILLVVHV GKCAGESIIT ALEETFTSNE VEVIEYHTFD SNMLIRESLP
LLHKHSDRIH IVTCTRNPVD RWISAFNWDY HTFFLSSQFY CPDHIIQLHR QYFSALELTN
GLMRKEIEAH ELATFKHLAY GHMAKGISWY LPEEIIDNLP KQAISTINVE TIQNDFNQCI
HTITTTFKQI GKREPTPIPK TKQNYQHWYK SGAFSAARQF SDAQRQFLEQ FLNEDYKVNN
KLNKI
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