8 homologs were found in PanDaTox collection
for query gene Swit_3506 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_3506  Flp/Fap pilin component  100 
 
 
63 aa  126  1.0000000000000001e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.171468  normal  0.803902 
 
 
-
 
NC_010551  BamMC406_1439  Flp/Fap pilin component  33.93 
 
 
72 aa  43.5  0.0009  Burkholderia ambifaria MC40-6  Bacteria  normal  0.719822  normal  0.158207 
 
 
-
 
NC_011989  Avi_0223  component of type 4 pilus pilin subunit protein  39.53 
 
 
61 aa  41.2  0.005  Agrobacterium vitis S4  Bacteria  normal  0.668081  n/a   
 
 
-
 
NC_007760  Adeh_2831  Flp/Fap pilin component  36.73 
 
 
59 aa  40.8  0.007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.676625  n/a   
 
 
-
 
NC_010002  Daci_2075  Flp/Fap pilin component  40 
 
 
58 aa  40.8  0.007  Delftia acidovorans SPH-1  Bacteria  normal  0.514501  normal  0.606618 
 
 
-
 
NC_011145  AnaeK_2919  Flp/Fap pilin component  42.86 
 
 
59 aa  40.4  0.009  Anaeromyxobacter sp. K  Bacteria  normal  0.14248  n/a   
 
 
-
 
NC_011886  Achl_2633  Flp/Fap pilin component  45.1 
 
 
66 aa  40.4  0.009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.691618 
 
 
-
 
NC_011886  Achl_2642  Flp/Fap pilin component  41.3 
 
 
71 aa  40.4  0.009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
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