Gene Swit_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3506 
Symbol 
ID5197764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3862818 
End bp3863009 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content62% 
IMG OID640583061 
ProductFlp/Fap pilin component 
Protein accessionYP_001263990 
Protein GI148556408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.171468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.803902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGT GCGTTCGATC GACGATGAAG CGCCTCTCCC GCGAGGAGAA GGGAGCTTCG 
GCCGTGGAAT ATGCGATCCT GGTGGGCGCC ATCGGAATCG CGCTGTCCGC CGGCGCCACC
AACTTCGGCA ACGGCCTGTC CAACAAGCTG TCGGGCATGC TCAACGTCAT CACCTTCCCC
GGCGATTCCT GA
 
Protein sequence
MLKCVRSTMK RLSREEKGAS AVEYAILVGA IGIALSAGAT NFGNGLSNKL SGMLNVITFP 
GDS