7 homologs were found in PanDaTox collection
for query gene Swit_3200 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_3200  lycopene cyclase  100 
 
 		 380 aa  749    Sphingomonas wittichii RW1  Bacteria  normal  0.696424  normal  0.730117 
 
 
-
 
NC_007794  Saro_1817  lycopene cyclase  43.32 
 
 		 398 aa  269  5e-71  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_3576  lycopene cyclase  39.67 
 
 		 385 aa  234  2.0000000000000002e-60  Xanthobacter autotrophicus Py2  Bacteria  normal  0.243504  normal  1 
 
 
-
 
NC_010338  Caul_1713  lycopene cyclase  37.53 
 
 		 395 aa  232  1e-59  Caulobacter sp. K31  Bacteria  normal  0.0564818  normal  0.226642 
 
 
-
 
NC_008048  Sala_3135  lycopene cyclase  39.04 
 
 		 385 aa  220  3e-56  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_2209  lycopene cyclase  34.32 
 
 		 384 aa  179  7e-44  Haliangium ochraceum DSM 14365  Bacteria  normal  0.644027  normal  0.133481 
 
 
-
 
NC_008726  Mvan_3170  FAD dependent oxidoreductase  60 
 
 		 477 aa  43.5  0.007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.0540221 
 
 
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