| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2209 |
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| Symbol | |
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| ID | 8544595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3070133 |
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| End bp | 3071287 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386916 |
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| Product | lycopene cyclase |
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| Protein accession | YP_003266647 |
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| Protein GI | 262195438 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR01789] lycopene cyclase
[TIGR01790] lycopene cyclase family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.644027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.133481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGACG CGACCTATCG ATACATCCTC GTCGGGGGCG GGCTGCAGAA CGGCCTGATC
GCGCTGGCGC TGCTCGCTGA CGATCCCGGC GTCGAGCTGG CGCTGGTGGA GCAGGGGCCT
GCACTCGGCG GCAATCACAC CTGGTGCTTT CACGCCGACG ACGTCCCCGC CGCAGCGCGG
GCCTACGTCG ACGCGCTGGT GGCGCACCGC TGGGACGGCT ACGACATCGC CTTCCCCGAG
CTCAAGCGCC GGCTCGACAC GCCCTACGCC GCGGTCAGCA GCGAGCGCTT CGATCAGGTG
GTGCAAGCGC GGCTGCGGCG CGCGCCCGGG TGCGCGCTGA TGCTCGACAC CCGGGTCGAG
GAGCTGAGCG CGCGCGGCGT GCGCCTGGCC GACGGTCGCA CGCTCTCGGG CGAAGTCGTC
ATCGACGCGC GCGGCCCCGA GCGCACCCAG CTCGACGACA CCCGCACCGG CTACCAGAAG
TTCGTCGGGC TCGAGCTGCG CCTGCGCGCG CCCCACGGCC GCGTGCGCCC CGTGCTCATG
GACGCCACCG TGCCCCAGAG CGACGGCTTT CGCTTCTTCT ACACGCTGCC CTTCGGCCGC
GATCGCCTGC TGCTCGAGGA CACCTACTTC TCCGACGCCG CCGCCCTCGA CGCCGACGCC
ATCGAGCGCG AAGTCCTGGC CTACGCAGCC GCCAACGGCT ACCAGATCGC CGCCATCGAG
CGCCGCGAGA GCGGGGTCTT GCCGCTGCCC TGGGCCGGCG ATGTGCGCGT CCCCGACCGC
GGCCCCCTGG TAGCCGGCTA CCAGGGCGGC TTCTTCCACC CCGTGACCGG CTACTCCTTC
CCCTTGGCCG TCCGGCTGGC CGAATACGTC GCCCACACCG CGCCCGGCGC GCTCTTTGGC
CCTGGCCTGG CGCGCCTCCT GCGCGAGCAC GAGAAGCAGC TCCGCTTCGC CCATCGCCTC
AACAAGATGC TCTTCTGCTG GTTCCCGCCG CATCTGCGCT ACCACGTCCT GGAGCGCTTC
TACCGCCTGC CCGAGGCGAC CATTCGGCGC TTCTACGCGC TCGATCTCAC CGCCGGCGAC
CGCGCGCGCA TCCTCGTCGG CCGCCCGCCC CGAGGGCTGT CGCTGCGGGC CGCGTTTTCC
AAGAGGAGAG CCTGA
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| Protein sequence | MLDATYRYIL VGGGLQNGLI ALALLADDPG VELALVEQGP ALGGNHTWCF HADDVPAAAR
AYVDALVAHR WDGYDIAFPE LKRRLDTPYA AVSSERFDQV VQARLRRAPG CALMLDTRVE
ELSARGVRLA DGRTLSGEVV IDARGPERTQ LDDTRTGYQK FVGLELRLRA PHGRVRPVLM
DATVPQSDGF RFFYTLPFGR DRLLLEDTYF SDAAALDADA IEREVLAYAA ANGYQIAAIE
RRESGVLPLP WAGDVRVPDR GPLVAGYQGG FFHPVTGYSF PLAVRLAEYV AHTAPGALFG
PGLARLLREH EKQLRFAHRL NKMLFCWFPP HLRYHVLERF YRLPEATIRR FYALDLTAGD
RARILVGRPP RGLSLRAAFS KRRA
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