| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3576 |
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| Symbol | |
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| ID | 5421503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3998250 |
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| End bp | 3999407 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640882830 |
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| Product | lycopene cyclase |
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| Protein accession | YP_001418461 |
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| Protein GI | 154247503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01789] lycopene cyclase
[TIGR01790] lycopene cyclase family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.243504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG TCTTCGTCGG CGCCGGACTT GCCAATTGCC TTATGGCGGC GCGCCTCGCG
GCCCAGCGTC CCGGCCTTCA CATGCTGCTG CTGGAAGCCG GCGAGAGCGT GGGCGGCAAT
CACAGCTGGT CCTGCCACGA CAGCGATCTC ACTGCCGCGC AGCGCGCCTT CCTCGCTCCC
TTCCAGAGCT ATCTCTGGGC CGGGCACGGG GTGCATTTTC CCGCTTTTTC GCGCACGCTC
AAAGGCGGCT ACGCCACCAT TTCCTCCGAG CGCATGGCCG AGGTGATGAA TGAGCGCCTG
TGCGCCGCCA TCCGCACCAA TGCCCGCGTC GCCCATGTGG CGCCCGACCA CGTGGTGCTG
GAGGGCGGCG AGCGCATCGA CGCCCGCGCC GTGGTGGACG GGCGCGGCCC ACTCGCCTCG
CGCCATCTCG ACCTCGGCTA CCAGACCTTC CTGGGGCAGG AACTGCGTAT GTCTCGGCCC
CATGGCCTCA CCCGCCCCAT CATCATGGAT GCGCGGGTGG AGCAGCTGGG CGGTTACCGC
TTCGTCTATG TGCTGCCGCT GGACGATGAC ACGCTGCTGG TGGAAGACAC CTATTATGCC
GACGGCCCGG ATCTTCCCGC CGATGCCTTG CGCGGCCGCA TTTCCGCCTA TGCCGCGGCG
CAGGGCTGGG CCGTGGATTA TGTGGTGCGG GAGGAGGACG GCATCTTGCC GATAGCGTTG
GGCGGCGACA TCAACGCCTT TCTTGCCGAG ACGCCTTCGG GCGTCGCGCC CGCCGGACTG
CGGGCAGGCC TGTTCCACCC CACCACCGGC TACAGCCTGC CCGACGCCAT GGCCCTGGCC
GACTCGGTGA GCGCGCTTGC CGACCTTTCC GGCCCCGCGC TTTCGGCGGC AGTGCGCAGC
CATGCGGCGG CGGCGTGGAA CGGGCGCGGC TTCTTCCGCC TGCTCAACCG CATGCTGTTC
CGCGCTGCCG ATCCGGAGCG GCGCTATGCC ATTCTCCAGC GCTTCTACGG GCTGTCGGAA
GACCTGATCG CCCGTTTCTA CGCCGATCGC CTCACCCTTG CCGACAAGGC GCGCATCCTT
TCGGGCCGCC CACCCGTATC GGTGTTCAGG GCGCTCTCCT GCCTTGTTGA GACGAAAGCC
GCACCCGGTT CCCCATGA
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| Protein sequence | MDIVFVGAGL ANCLMAARLA AQRPGLHMLL LEAGESVGGN HSWSCHDSDL TAAQRAFLAP
FQSYLWAGHG VHFPAFSRTL KGGYATISSE RMAEVMNERL CAAIRTNARV AHVAPDHVVL
EGGERIDARA VVDGRGPLAS RHLDLGYQTF LGQELRMSRP HGLTRPIIMD ARVEQLGGYR
FVYVLPLDDD TLLVEDTYYA DGPDLPADAL RGRISAYAAA QGWAVDYVVR EEDGILPIAL
GGDINAFLAE TPSGVAPAGL RAGLFHPTTG YSLPDAMALA DSVSALADLS GPALSAAVRS
HAAAAWNGRG FFRLLNRMLF RAADPERRYA ILQRFYGLSE DLIARFYADR LTLADKARIL
SGRPPVSVFR ALSCLVETKA APGSP
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