Gene Mvan_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3170 
Symbol 
ID4644160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3371806 
End bp3373239 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content70% 
IMG OID639806647 
ProductFAD dependent oxidoreductase 
Protein accessionYP_953978 
Protein GI120404149 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0540221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCC GTAGTGTGCG CGCTGTGCAG ACAGTCTTCG ATGCCGATGT CGACCCGGCG 
CTGGTGGACC GCTCGCTGGC CGGGACCACG TCGGGGTCGG TGTGGCTCGA CATCCCGCGC
CCGCAGTTCC CGACCCCATC CGGCCCTCCC GTCACCTGCG ACCTGCTGGT CATCGGCGGC
GGCTACACCG GCCTGTGGAG CGCGCTGCAC GCCGCCCGTC GCCACCCGGA CCGCCGCATC
GTCCTGATCG AGGCCGACCG GATCGGCTGG GCCGCCTCCG GCCGCAACGG CGGATTCGTC
GACGCCAGCC TCACCCACGG CTACGAGAAC GGAAAATCGC GCTGGCCCAA CGAGATCGAC
ACGCTCGAAG CGATGGGCGT GGAGAACCTG GACGGCATGC AGGCCGAGAT CGCCGAACTC
GGACTCGACG TCGAGTGGGA ACGCACCGGC ATGCTCACCG TGGCCACCGA ACCGCACCAG
GTGGAATGGC TCGCCGACGC CGCCGCCGAC GGGCAGGGAC TGTTTCTCGA CCAGCCGCAG
GTCCGCGCGG AGGTGGACTC ACCCACCTAC CGGGCCGGGC TGTTCAGCGC CGACACCTGC
GCGATCGTCC ACCCCGCCAA GCTGGCACTG GAACTGGCGC GGGCCTGCCG CGAGGCCGGC
GTCGAGGTGT TCGAGCACAC CACCGCGACA CGAATCGATT CGGGCGGCGC CGCGCTGCGC
GTGCACACCG ACGGACCCGC GATCAGCTGC CGCCAGGTGG TGCTGGCCAC CAACGTGTTT
CCCAGCCTGC TGCGGCGCAA CCGGCTCTAC ACCGTGCCGG TATACGACTA CGTGCTGGCC
ACCGAACCGC TCACCGAAAC CCAGCTCCAC CGCATCGGCT GGCAGGCCAG ACAGGGAATC
GGCGACAGCG CCAACCAATT TCACTACTAC CGCCTGACGA AGGACAACAG GATCGTCTGG
GGCGGCTACG ACGCCGTCTA CCACTTCGGC AGGCGGGTGA ACGCGGCCTA CGAGGACCGC
GATGAGACCT ACCGCCGGCT GGCCGCGCAT TTCTTCATCA CGTTTCCGCA ATTGGACGAC
GTCCGGTTCA CCCACCGGTG GGCGGGCGCC ATCGACACCA ACACCAGGTT CTGTGCGCAC
TGGGGGCTGG CCCGCGAGGG CAGGGTCGCC TACGTCAACG GCTACACCGG ACTCGGCGTG
GCGGCCACCC GCTTCGCCGC CGACGTGTGC CTGGACCTGC TGGACGGCGC ACCGTCACCG
CGCACCGAGC TGGAGATGGT GCGCAGCAAG CCGTTGCCGT TCCCGCCCGA GCCGCTGGCC
AGTATCGGGA TCCAGGCCAC CAGATGGTCA CTGGATCGCG CCGACCACTC CGCGGGCCGG
CGCAACCTGC TGTTGCGGGC CCTCGACGCC GCCGGCCTCG GCTTCGATTC CTGA
 
Protein sequence
MPRRSVRAVQ TVFDADVDPA LVDRSLAGTT SGSVWLDIPR PQFPTPSGPP VTCDLLVIGG 
GYTGLWSALH AARRHPDRRI VLIEADRIGW AASGRNGGFV DASLTHGYEN GKSRWPNEID
TLEAMGVENL DGMQAEIAEL GLDVEWERTG MLTVATEPHQ VEWLADAAAD GQGLFLDQPQ
VRAEVDSPTY RAGLFSADTC AIVHPAKLAL ELARACREAG VEVFEHTTAT RIDSGGAALR
VHTDGPAISC RQVVLATNVF PSLLRRNRLY TVPVYDYVLA TEPLTETQLH RIGWQARQGI
GDSANQFHYY RLTKDNRIVW GGYDAVYHFG RRVNAAYEDR DETYRRLAAH FFITFPQLDD
VRFTHRWAGA IDTNTRFCAH WGLAREGRVA YVNGYTGLGV AATRFAADVC LDLLDGAPSP
RTELEMVRSK PLPFPPEPLA SIGIQATRWS LDRADHSAGR RNLLLRALDA AGLGFDS