20 homologs were found in PanDaTox collection
for query gene Svir_08720 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_08720  ACT domain-containing protein  100 
 
 
222 aa  424  1e-118  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6036  amino acid-binding ACT domain protein  72.4 
 
 
215 aa  295  5e-79  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3245  amino acid-binding ACT domain protein  55.2 
 
 
221 aa  239  2.9999999999999997e-62  Gordonia bronchialis DSM 43247  Bacteria  normal  0.163508  n/a   
 
 
-
 
NC_008726  Mvan_2113  amino acid-binding ACT domain-containing protein  54.3 
 
 
222 aa  230  1e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.2373  normal 
 
 
-
 
NC_009338  Mflv_4247  amino acid-binding ACT domain-containing protein  53.85 
 
 
222 aa  230  2e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.100152  normal  0.817621 
 
 
-
 
NC_008146  Mmcs_1889  amino acid-binding ACT  55.41 
 
 
222 aa  227  1e-58  Mycobacterium sp. MCS  Bacteria  normal  0.0231106  n/a   
 
 
-
 
NC_009077  Mjls_1869  amino acid-binding ACT domain-containing protein  55.41 
 
 
222 aa  227  1e-58  Mycobacterium sp. JLS  Bacteria  normal  normal  0.089814 
 
 
-
 
NC_008705  Mkms_1935  amino acid-binding ACT domain-containing protein  55.41 
 
 
222 aa  227  1e-58  Mycobacterium sp. KMS  Bacteria  normal  normal  0.845407 
 
 
-
 
NC_013757  Gobs_4085  amino acid-binding ACT domain protein  51.79 
 
 
226 aa  221  7e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1459  amino acid-binding ACT domain protein  52.97 
 
 
228 aa  216  2.9999999999999998e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  0.583001  normal  0.306182 
 
 
-
 
NC_014158  Tpau_2899  amino acid-binding ACT domain protein  53.18 
 
 
217 aa  216  2.9999999999999998e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13028  hypothetical protein  50.45 
 
 
240 aa  211  4.9999999999999996e-54  Mycobacterium tuberculosis F11  Bacteria  normal  0.0105664  normal  0.507184 
 
 
-
 
NC_007777  Francci3_3646  amino acid-binding ACT  44.14 
 
 
236 aa  148  7e-35  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0254  amino acid-binding ACT domain-containing protein  36.11 
 
 
207 aa  114  1.0000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1875  amino acid-binding ACT domain protein  38.18 
 
 
234 aa  110  1.0000000000000001e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.656934  n/a   
 
 
-
 
NC_014165  Tbis_1888  amino acid-binding ACT domain-containing protein  31.94 
 
 
206 aa  86.7  3e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.229412 
 
 
-
 
NC_013595  Sros_3349  hypothetical protein  31.05 
 
 
210 aa  84.7  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  decreased coverage  0.0029421 
 
 
-
 
NC_008578  Acel_1531  amino acid-binding ACT domain-containing protein  28.17 
 
 
211 aa  58.5  0.00000008  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1467  amino acid-binding ACT domain protein  43.28 
 
 
256 aa  42.7  0.004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.63814  n/a   
 
 
-
 
NC_013739  Cwoe_2866  Malate dehydrogenase (oxaloacetate- decarboxylating)  37.5 
 
 
489 aa  42  0.007  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
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