8 homologs were found in PanDaTox collection
for query gene Svir_01700 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013159  Svir_01700  Helix-turn-helix protein  100 
 
 		 122 aa  239  1e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.935014  normal  0.201437 
 
 
-
 
NC_007777  Francci3_4017  XRE family transcriptional regulator  53.39 
 
 		 124 aa  117  7.999999999999999e-26  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B0115  hypothetical protein  30.19 
 
 		 138 aa  59.7  0.00000001  Burkholderia xenovorans LB400  Bacteria  normal  0.274935  normal  1 
 
 
-
 
NC_008322  Shewmr7_0717  XRE family transcriptional regulator  36.67 
 
 		 96 aa  50.1  0.00001  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0220217 
 
 
-
 
NC_012034  Athe_2435  transcriptional regulator, XRE family  35.96 
 
 		 105 aa  45.1  0.0004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0810  XRE family transcriptional regulator  33.8 
 
 		 85 aa  44.7  0.0005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.697679  normal  1 
 
 
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NC_013732  Slin_6857  helix-turn-helix domain-containing protein  35.62 
 
 		 119 aa  43.1  0.001  Spirosoma linguale DSM 74  Bacteria  normal  0.44264  normal  0.767955 
 
 
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NC_013131  Caci_6930  helix-turn-helix domain protein  35.21 
 
 		 160 aa  41.2  0.005  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00370305  hitchhiker  0.00191529 
 
 
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