Gene Francci3_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4017 
Symbol 
ID3906978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4804477 
End bp4804851 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content67% 
IMG OID637881346 
ProductXRE family transcriptional regulator 
Protein accessionYP_483096 
Protein GI86742696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCCGCGTGGA CGTCAACGGG CTGTACGGCG CGCTCGACGC AGCGCGCACG 
GCACGGGGCC TGTCCTGGAG GCAGCTGGCC AAGGAGATCG AGGTGAGCCC GTCGACGATG
ACGCGGCTCG CCAACGGCCA CAAGCCCGAG GTGGACGCCT TCGTCGCGAT GACCCGCTGG
CTGGGGATGC CCGCAGAGAG GTTTATGCTT GACGACGGCG ACGACGAGCG CCCACAGCCT
GAACTGGTCG CCGAACTAGC CCCGCTTCTA CGGGCGCGCA AGGACCTCGA CGCCGAAGAT
GTCCGACACC TACAAGAGAT CATCGGGTCC GCCGTGCGCC GCTTCAACGC CGATCGGGAC
GCGCGGGAGA CATAA
 
Protein sequence
MAKTRVDVNG LYGALDAART ARGLSWRQLA KEIEVSPSTM TRLANGHKPE VDAFVAMTRW 
LGMPAERFML DDGDDERPQP ELVAELAPLL RARKDLDAED VRHLQEIIGS AVRRFNADRD
ARET