Gene Svir_01700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01700 
Symbol 
ID8385508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp179549 
End bp179917 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content68% 
IMG OID644974274 
ProductHelix-turn-helix protein 
Protein accessionYP_003132084 
Protein GI257054252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.935014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.201437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCC GGGTGGACAC GCAACGGCTC TACGAAGCAC TCGACGCGCA ACGCCGCGCA 
CGGAACCTGT CGTGGAGACA ACTCGCGCGA CAGGCCGGGG TGAGCCCGTC CCTGCTCAGC
AGGATGGGCA ACGGTCAACG TCCCGACCTG GACGGCTTCG TCGCGCTCGT GCAATGGCTG
GGCGCGCAGG CCGAGGAGTT CATGGTGTGG CCCGACGAAC GACCACGCGA CGAGCAACCC
TCACTGGAAA GCCAGCTGGC CCTGTTGCTG CGCGCCCGCG ACGACCTCGA CGAGGCGGAC
AGGGAATACC TGCTGGACAT CGTGCGCGCC ACGATGCGCC GGATCAAGGC GGACAGACGG
GGGGTCTGA
 
Protein sequence
MTGRVDTQRL YEALDAQRRA RNLSWRQLAR QAGVSPSLLS RMGNGQRPDL DGFVALVQWL 
GAQAEEFMVW PDERPRDEQP SLESQLALLL RARDDLDEAD REYLLDIVRA TMRRIKADRR
GV