Gene Slin_6857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6857 
Symbol 
ID8716125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp24637 
End bp24996 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content47% 
IMG OID 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_003391605 
Protein GI284005786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.44264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.767955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG AGTTAGATAC CAAAAAGTTG GCTACAATGG TACGGGCGCA ACGTGCGAAT 
CGTCCGCTCC GGGAAGTGGC CGACGAAATT GGCGACGTGA GTGCTTCTAC TCTGCACCGC
CTGGAAGTAG GCAAGTGTCC AGATATGGCT GTTTTCTTGC GTATATGTAG CTGGCTTAAT
GTGAAACCCG AACAATTCTT TAGCCATTCA GACCCAACAC AAACTGTCCA ACAGATAGGT
CAGCATTACT CACAAGGCCA AATTATTAAT TTAGTCCGGT CTGATTCGGC CCTATCTCCC
GTTGTTGCCA ATGTTTTATC AGCAATCATA ACGGCGGCTT ACGAAATTGA TCGGACTTGA
 
Protein sequence
MSYELDTKKL ATMVRAQRAN RPLREVADEI GDVSASTLHR LEVGKCPDMA VFLRICSWLN 
VKPEQFFSHS DPTQTVQQIG QHYSQGQIIN LVRSDSALSP VVANVLSAII TAAYEIDRT