8 homologs were found in PanDaTox collection
for query gene Ssed_3893 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_3893  hypothetical protein  100 
 
 		 640 aa  1299    Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.429721 
 
 
-
 
NC_009831  Ssed_3892  hypothetical protein  51.15 
 
 		 644 aa  616  1e-175  Shewanella sediminis HAW-EB3  Bacteria  normal  0.810421  normal  0.0279299 
 
 
-
 
NC_010506  Swoo_0423  hypothetical protein  22.67 
 
 		 809 aa  49.7  0.0002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3196  glycosyl hydrolase family chitinase  29.9 
 
 		 861 aa  46.6  0.002  Burkholderia xenovorans LB400  Bacteria  normal  0.0825971  normal  1 
 
 
-
 
NC_010506  Swoo_0007  Na-Ca exchanger/integrin-beta4  31.25 
 
 		 911 aa  46.2  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.0000289605 
 
 
-
 
NC_008390  Bamb_1428  chitinase  32.91 
 
 		 972 aa  45.8  0.003  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_02194  hypothetical protein  28.71 
 
 		 985 aa  45.4  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0007  Na-Ca exchanger/integrin-beta4  29.7 
 
 		 913 aa  43.9  0.008  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
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