Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0423 |
Symbol | |
ID | 6114653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 522059 |
End bp | 524488 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641631907 |
Product | hypothetical protein |
Protein accession | YP_001758816 |
Protein GI | 170724790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGA AAAGTCTAGT TTCATTATGT GTTACCAGTG CTTTAGTGAG TGGATGTGGT AGCTCTGATG ATAATGAGCC TCAAGTAGAA GTTAAAAATA CAGCCCCCAC ACTAAGTGCC AATTTTACAC CAGTAATAGA GAAGTCTGAG TCGACGCTAT CAGTATCTGC AAGCGATAGT GATGGCAGTA TTGCGAGTTA TTTATGGGAA CAAACTGCTG GTCCTGAATT AGAGTTAACT GGCATAGACT CGGAGCAAAT TAGTTTTACC GCTCCTATGG TATCTGTCGA TACACCAATC AGTTTTAAAG TGACGGTGAC TGATAATGAA GGCGCTACAA CTTCGGTGAC TGAGGACACC AATATTGAGC GAATTGAAAG CATCTATAAA CTTGCTGGCA AGGTTGTTGG TGAACAATAT ATTGGTGCTA AAGTTACTGC GGCTGTCGGT GAAGAGTCTG TAGAAGGTCT AGTAGACGAT GCTGGCAGCT TTACTCTCGA TCTCGCTGTT GATGATGATG TTGCGTTAAA TTCAAGTGTT AAGTTATCAG CAAATGGTGA AACATTATTA GGACTTAGCT CTTTGCTGCC TTCTTTAGAA CAATTAGGTG GCTTGATTAT TGATGCGCAA GCAAGTCAAA AGCGTCAAAG TGTTGCTTCC CAAGCTGCAC AAGCACTTGA GAACACTCCT ACCATCTCAG TATCTGCAGT ATCAACGGCA TTATACAGTC TTCTCGTTGC TGCAAATGGT GGTGAAGAGC CAAGTAACAT AGAGGTTTTT GAGTTGGTCG AAAGTCAGGT TGACCCTGAC GCCTTGATTG AAGCGGCTGC AGTAGTGCAG ATTCTTATTA ATAGTGATGA TGCAATACTC GAAGACGGAG CTGATTTAAT CGCGGTTCTT GCCGACCCTG TACAGTACAA TGCGTTGGTT GAAACGATTG AAGAGGCGAC GCCTGGTGCT ATTGAGGATG CAGTTGATGC AGTTGTTGCG GATCCTGAGT TAACGCCACC GGTTGAAGCG GCTGATATTC CATCTTTATA TTATCGAACC TCTCCAGTAG CGCCGACTTT TATTGCTCGT GGCGGTAATC GCTATGAGTT TGCTGAGGAT AGTACAGGTG AAGTTGCGAC AAGCTATGGG GTCTCATCGT TTACATGGTC GTTAAATGAA GGTGACATTA TGCTGACTTA TCTTGAAGAT CAAGGCAGTG TTAGTTATCC AAGTGTCGAC TCAATTGCAG GACTTACCCA AGAACAGATA GACAAAATAC ACGACGTGGG TATTTTTCAG GTTGAAGTGA CAGATGAGAG ACTTACTGAG CGTATGACTC GTTTGACAAC GGGCTCTGCT TTAGATACGT ATCGTATAGA AGTGGTTACT CGAGTAACTA TGGCTCCCAT CGAGCTCGAT ACTGAAGTGA TTACTATTCC TGCTTGGGGA GATACTTACT CTTCAGATAC CTTAATGCGT AAGTCGGCTA GCGGTGGCGT TGAGTTTGTC GATGCTGATA TTGCCGGTTT ATGGGGTTTT GAGGTTTATA ATAACGAAGG AGTAAACTCT CTCGGTTCTG CGGCTACTAA CCATTTTGAA GTGTTGGAGT TTCTGACCGA TGGTAGTGGC ACGAGTAAAG ATAGCGGAGT GGAGTTTGAC TGGTCTGTAT CCAATGGAGT TTTGACCATA GTTTTTGCTG ACTTTAGCCA AACATACTCA GTTATTGACA GTAACGAAGG TGACTTGGCG ATATACTCTG AAGCTTCAGA TCATGATGGC AAGTTGTTAG CGTCACTATT TGGCTATGGA ACTCAGTTAG ATGCAGACAC AAGTTTTACT GCTGAAACGG CAGTAACAGG GTCAGAGCAA TATTGGCAGT CAATGATAAA TCAGTGGACA GCCAGCTCTT GGGATGGTGA CAAACTGAAT TTTTGCTATG ACACGGATAA TCTTGATTGC ACTAGTTGGG GCAGTGTATT TTTTGGCTTC CAAATTTTAG ACGACAGTTC AGGCACTCGT TTTTATGACG TAGAAGGTAC ACCACCTAAT CTTACAAACT ATTTTGGTAA TGAACTTAGT TGGACTGTTG AGGCTAATGG AAAGCTTAAA CACACCTATG TTGATTGGAA GTGTTGGGAT AAGGATGAGT CTTGTCGTAA TCGTCAGTGG CGCTTATTGA AAACAGTTGA TGGTCGTTTA GGTCAGCGTA TTTATGTACA AGAATTTGAC CAGCTTAAAA TTAATTCAAC TGATGATTGG GAGTATTTTA TTGCACCGCG TTGGAATATG TATGAGTTAA TTGACTTAGA ATATTTTAAT GATGTTAATA CTGCTCAGTC GAATGCCGCA ACTAAGAGAC AGTCGAGTAG CAAACAAGCC ATCACTAGTG TTGAGAGAAC CATTCTTGAG CCAACTAAGG CTGCACAACT TCATCATTAA
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Protein sequence | MLKKSLVSLC VTSALVSGCG SSDDNEPQVE VKNTAPTLSA NFTPVIEKSE STLSVSASDS DGSIASYLWE QTAGPELELT GIDSEQISFT APMVSVDTPI SFKVTVTDNE GATTSVTEDT NIERIESIYK LAGKVVGEQY IGAKVTAAVG EESVEGLVDD AGSFTLDLAV DDDVALNSSV KLSANGETLL GLSSLLPSLE QLGGLIIDAQ ASQKRQSVAS QAAQALENTP TISVSAVSTA LYSLLVAANG GEEPSNIEVF ELVESQVDPD ALIEAAAVVQ ILINSDDAIL EDGADLIAVL ADPVQYNALV ETIEEATPGA IEDAVDAVVA DPELTPPVEA ADIPSLYYRT SPVAPTFIAR GGNRYEFAED STGEVATSYG VSSFTWSLNE GDIMLTYLED QGSVSYPSVD SIAGLTQEQI DKIHDVGIFQ VEVTDERLTE RMTRLTTGSA LDTYRIEVVT RVTMAPIELD TEVITIPAWG DTYSSDTLMR KSASGGVEFV DADIAGLWGF EVYNNEGVNS LGSAATNHFE VLEFLTDGSG TSKDSGVEFD WSVSNGVLTI VFADFSQTYS VIDSNEGDLA IYSEASDHDG KLLASLFGYG TQLDADTSFT AETAVTGSEQ YWQSMINQWT ASSWDGDKLN FCYDTDNLDC TSWGSVFFGF QILDDSSGTR FYDVEGTPPN LTNYFGNELS WTVEANGKLK HTYVDWKCWD KDESCRNRQW RLLKTVDGRL GQRIYVQEFD QLKINSTDDW EYFIAPRWNM YELIDLEYFN DVNTAQSNAA TKRQSSSKQA ITSVERTILE PTKAAQLHH
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