| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3893 |
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| Symbol | |
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| ID | 5614178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4757855 |
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| End bp | 4759777 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934847 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475625 |
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| Protein GI | 157377025 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.429721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATAT ATTGCAGGTT TGCATTAGTC TTTATCAGTT TTATTTTATT GGGTTGCTCG
GGTTCAGACG ATAACACAGA GGAGGTCAAC CTTCCGCCAG TCATTGAGCT GCAAGCGCCA
TCATCTGCGC TCTCTCTCGA GCAGGTAACC ATTACCGCTC AAGTTACCGA TCCTGAAAAT
GACACAGTTT CTCTACTCTG GCACCTGAGT TCCGATGCCG GGCTCGATAT GGAAGTGGTC
GATGTTAACG AGCTGAGTTA TCAAATTCCG CTGACCTCGG TCGATACAGC TTACACAGTG
ACCTTAGTGG CTACCGATAG CCATGGCAAT CAAGCGTCCG AGTCATCGAC CTTTACCGTG
CCAGCGTTGG ATGTGAGCTT TACACAGCCC TTCGATGCGA TATCCCAGCG ATATGTGGAC
ACAGAAGCTA ATCTGCTAAA TATCGCCTCT ACCGATATCA TCTATGGCTG GGGAATTAGT
CAATATCCTC TTACCATTAT TGCGCCTAAT CGGGTACGTT TTTTTGCCGC TAAAGAGCTG
ACGGAAGAGT ATGATCCTAA TGCTGAGCCC GAACGTATTC GCGGCGAGGG GATCACCGAA
GATTTGCTGC TGACGCTAAC TGTGTCAGAT GGGAGCACCA GCATCGACTT TGACAAGACG
ATTATCGTTC AACCCATCCA GAAACTGACT TCATGGCCGG AGCACATTGT TAGCGCAGAA
ATGCAGGCTA CAATAACTGC AGCAACTATT AATAGTTTAG AGGTTATCGA TAACTGCCTC
AGTCGCGAGA ATACGGTCAA GAATTATTTC GACTACAACC AGAATGGTGT CGATGATGTT
TTCTGTACCT ACTCAGATAC GCTCTATTTT TATCTGTCGG ATATCGACTC TGCCGGAAAA
ACCATCTATA CCGAGTCAGT TGTAATTGAA AACCAAGTTC TTACCGAGTA TTCGGAGCTT
ATCGATCTCG ATAAAAATGG CATCCCCGAG CTAGTGCTGG CAGTAGGTCC TGGGTATGTT
GGAACCCTCA TTTCGCTAAC TTATAATTCA TCGAGCCATT CTTTCGATGA GAAGGAGCTT
ATAGATATCG GTTATAGTGC AAAAGATTAT CGCCTCACCG AGGCAAATGG CATCTTGTCT
ATGGCGATTC GAATCGATGG ACAGCAGATT TCAACCGGCC TAGCAACTGA TTATATTAAG
GCACTTATCT TCGATGCTAA GGGAGAGGAG CTTAAAAAGA CAGATGAGTT CGAAGTTGTG
GAGTGCCTGG ACTGTGTCTT GGTTACCTTG GCTGTGGGTG ATTTGAGCGG ACAAGGTGTC
GATGAACTGT TGATTGAGAA CCGAGAATCC AGTATTTACG GTCCCTCGAA TTTTCATAAT
AGGGTGAGTA CCATTAGTGG TGATTACACT AAATTATCTG CTTTTCCTAT GTTTTTCAGG
GAGGTGTATC AGGAAGATAT TCATGATGAT GGAACGCTTG AGTGGGTAGG AGTAACCGAA
ACCTACAAAG ATGTAGGTAT ATTTATCCCA GACTATAAGC TTCACTTAAC GCTGGACCAA
GAGGGCGAGC CTAATACCGA GGTGTTAGAA AGTTACTATA GTGATCTATT TTTCAACTAT
GGATCAGAGT CTTATGCAGC GGATTTGAAT CAAGATGAGC AGTTAGATGA GTTCACTAAG
CTTAGTTACT ATGAAGAAGA CTATTATCAA AAGGATCGCT TCTATAGTTA CACGCTAGCC
GGGTCAGATA AGCGGGTGCT CATATCCACT GAATCATATG ACACTATCCG AGATGACTTT
ATCGGTCTGG AGGATATGAA TAACAATGGC TATCTGGACC TCAAGTTTGG TCAGGTTTCT
GAGAATAACA TCGAGACTGT GACCTCCTGG CTCGAGAATG TAGAAGGCTA TCCGTTCGAG
TAA
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| Protein sequence | MLIYCRFALV FISFILLGCS GSDDNTEEVN LPPVIELQAP SSALSLEQVT ITAQVTDPEN
DTVSLLWHLS SDAGLDMEVV DVNELSYQIP LTSVDTAYTV TLVATDSHGN QASESSTFTV
PALDVSFTQP FDAISQRYVD TEANLLNIAS TDIIYGWGIS QYPLTIIAPN RVRFFAAKEL
TEEYDPNAEP ERIRGEGITE DLLLTLTVSD GSTSIDFDKT IIVQPIQKLT SWPEHIVSAE
MQATITAATI NSLEVIDNCL SRENTVKNYF DYNQNGVDDV FCTYSDTLYF YLSDIDSAGK
TIYTESVVIE NQVLTEYSEL IDLDKNGIPE LVLAVGPGYV GTLISLTYNS SSHSFDEKEL
IDIGYSAKDY RLTEANGILS MAIRIDGQQI STGLATDYIK ALIFDAKGEE LKKTDEFEVV
ECLDCVLVTL AVGDLSGQGV DELLIENRES SIYGPSNFHN RVSTISGDYT KLSAFPMFFR
EVYQEDIHDD GTLEWVGVTE TYKDVGIFIP DYKLHLTLDQ EGEPNTEVLE SYYSDLFFNY
GSESYAADLN QDEQLDEFTK LSYYEEDYYQ KDRFYSYTLA GSDKRVLIST ESYDTIRDDF
IGLEDMNNNG YLDLKFGQVS ENNIETVTSW LENVEGYPFE
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