13 homologs were found in PanDaTox collection
for query gene Spro_0313 on replicon NC_009832
Organism: Serratia proteamaculans 568



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_0313  hypothetical protein  100 
 
 
55 aa  112  2.0000000000000002e-24  Serratia proteamaculans 568  Bacteria  normal  decreased coverage  0.000000314424 
 
 
-
 
NC_009436  Ent638_1532  AraC family transcriptional regulator  94.12 
 
 
340 aa  70.1  0.00000000001  Enterobacter sp. 638  Bacteria  normal  0.580066  normal  0.737753 
 
 
-
 
NC_010086  Bmul_5115  AraC family transcriptional regulator  61.76 
 
 
333 aa  45.8  0.0002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0388343  normal  0.0650522 
 
 
-
 
NC_008391  Bamb_5293  AraC family transcriptional regulator  58.82 
 
 
344 aa  44.7  0.0004  Burkholderia ambifaria AMMD  Bacteria  normal  0.273034  normal 
 
 
-
 
NC_008543  Bcen2424_3559  AraC family transcriptional regulator  58.82 
 
 
349 aa  44.7  0.0004  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3961  AraC family transcriptional regulator  58.82 
 
 
349 aa  44.7  0.0004  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0742642 
 
 
-
 
NC_010552  BamMC406_3471  AraC family transcriptional regulator  58.82 
 
 
344 aa  44.7  0.0004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.340628  normal 
 
 
-
 
NC_009654  Mmwyl1_2770  helix-turn-helix domain-containing protein  55.88 
 
 
328 aa  44.7  0.0005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1407  transcriptional regulator, AraC family  58.82 
 
 
320 aa  43.9  0.0006  Ralstonia pickettii 12J  Bacteria  normal  0.51399  normal 
 
 
-
 
NC_012856  Rpic12D_1449  transcriptional regulator, AraC family  58.82 
 
 
320 aa  43.9  0.0006  Ralstonia pickettii 12D  Bacteria  normal  normal  0.380314 
 
 
-
 
NC_007511  Bcep18194_B2564  AraC family transcriptional regulator  58.82 
 
 
349 aa  43.9  0.0008  Burkholderia sp. 383  Bacteria  normal  normal  0.972599 
 
 
-
 
NC_009436  Ent638_2354  AraC family transcriptional regulator  61.76 
 
 
318 aa  42.4  0.002  Enterobacter sp. 638  Bacteria  normal  0.0793456  normal 
 
 
-
 
NC_012917  PC1_0842  transcriptional regulator, AraC family  61.76 
 
 
318 aa  42.7  0.002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.404534  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>