Gene Rpic_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1407 
Symbol 
ID6288554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1496865 
End bp1497827 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID642624974 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001898980 
Protein GI187928493 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.51399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC CCCTGCCCGA CGTGCACGAC CTTGTTAGCG AGCTGCTGCT CGGCATGCGG 
CTGAGCGGCG TCCAGTACCG CCGTATCCAC GTGGCGCGGC CCTTCGGGCT GAGCTTTGGC
AAGGCGCCGG GGCGTGCGCA GTTTCACTTC GTGGGGCGCG GGCCGGTGCT GCTGCGCGAC
GCGTCGGGGG CGACGATGCG GCTGGAAGCG GGCGATGCGG TGTTGCTGCC GCAGGGCACC
CCGCACGCGT TGCTGTCCGA TCCGGATGCG CCGTGCCGCG AGATCGCCGG CTTTGAATCC
GCGAAGATCT GCGACACGGT GGCGTCGGTT GGCGTCGGGG CGGAAGCGGC CCCGGGCGAT
GCGCTCATTT TCAGCGCCTG CATGGAGCTG GATCTGGGCG GCATGCAGCC CTTGGTGGGC
ACGATGCCGG AGTTCATGCA CGTCGGCACC TTGCTCGCGC GCTACCCGGA AATCCGCCCG
ATGCTCGACG CGATGGAGCG CGAATCGTGC TCGGAGCGCG CAGGTTTTGC CGGTATCCTC
GCGCGGCTGG CGGACGTGGT GGCCGCCTTC ATCGTGCGCG GCTGGGTGGA GTGCGGCTGC
GGCGACGCCA CGGGCTGGGT GCAGGCGCTG CGCGAGCCGA AACTCGGTCC GGCGATCGTC
GCCCTGCATC GTGACCCAGG GCGCAACTGG AGCGTCGCGG AGCTGGCAGC GCAAGCCGGG
GTCTCGCGCT CGGTGTTTGC CGAGCGCTTC CTTGCAGCGA CCGGAATGAC GCCCGTGCGC
TATCTGACCG AGCTGCGGAT GCGGCTCGCC GCGCAATGGA TCACGCGTGA CCGCGAGGCG
ATCGAAGCCG TCGCGTACCG GCTCGGCTAT GGGTCGCTCG CTGCGTTCAG CCGCGCGTTC
AAGCGGGTGG TCGGACGACC GCCGGGGGCC ATGCGCGCGG AGGGTGCGGA AGCCGACGCG
TGA
 
Protein sequence
MLTPLPDVHD LVSELLLGMR LSGVQYRRIH VARPFGLSFG KAPGRAQFHF VGRGPVLLRD 
ASGATMRLEA GDAVLLPQGT PHALLSDPDA PCREIAGFES AKICDTVASV GVGAEAAPGD
ALIFSACMEL DLGGMQPLVG TMPEFMHVGT LLARYPEIRP MLDAMERESC SERAGFAGIL
ARLADVVAAF IVRGWVECGC GDATGWVQAL REPKLGPAIV ALHRDPGRNW SVAELAAQAG
VSRSVFAERF LAATGMTPVR YLTELRMRLA AQWITRDREA IEAVAYRLGY GSLAAFSRAF
KRVVGRPPGA MRAEGAEADA