Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1407 |
Symbol | |
ID | 6288554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1496865 |
End bp | 1497827 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642624974 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001898980 |
Protein GI | 187928493 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.51399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACTC CCCTGCCCGA CGTGCACGAC CTTGTTAGCG AGCTGCTGCT CGGCATGCGG CTGAGCGGCG TCCAGTACCG CCGTATCCAC GTGGCGCGGC CCTTCGGGCT GAGCTTTGGC AAGGCGCCGG GGCGTGCGCA GTTTCACTTC GTGGGGCGCG GGCCGGTGCT GCTGCGCGAC GCGTCGGGGG CGACGATGCG GCTGGAAGCG GGCGATGCGG TGTTGCTGCC GCAGGGCACC CCGCACGCGT TGCTGTCCGA TCCGGATGCG CCGTGCCGCG AGATCGCCGG CTTTGAATCC GCGAAGATCT GCGACACGGT GGCGTCGGTT GGCGTCGGGG CGGAAGCGGC CCCGGGCGAT GCGCTCATTT TCAGCGCCTG CATGGAGCTG GATCTGGGCG GCATGCAGCC CTTGGTGGGC ACGATGCCGG AGTTCATGCA CGTCGGCACC TTGCTCGCGC GCTACCCGGA AATCCGCCCG ATGCTCGACG CGATGGAGCG CGAATCGTGC TCGGAGCGCG CAGGTTTTGC CGGTATCCTC GCGCGGCTGG CGGACGTGGT GGCCGCCTTC ATCGTGCGCG GCTGGGTGGA GTGCGGCTGC GGCGACGCCA CGGGCTGGGT GCAGGCGCTG CGCGAGCCGA AACTCGGTCC GGCGATCGTC GCCCTGCATC GTGACCCAGG GCGCAACTGG AGCGTCGCGG AGCTGGCAGC GCAAGCCGGG GTCTCGCGCT CGGTGTTTGC CGAGCGCTTC CTTGCAGCGA CCGGAATGAC GCCCGTGCGC TATCTGACCG AGCTGCGGAT GCGGCTCGCC GCGCAATGGA TCACGCGTGA CCGCGAGGCG ATCGAAGCCG TCGCGTACCG GCTCGGCTAT GGGTCGCTCG CTGCGTTCAG CCGCGCGTTC AAGCGGGTGG TCGGACGACC GCCGGGGGCC ATGCGCGCGG AGGGTGCGGA AGCCGACGCG TGA
|
Protein sequence | MLTPLPDVHD LVSELLLGMR LSGVQYRRIH VARPFGLSFG KAPGRAQFHF VGRGPVLLRD ASGATMRLEA GDAVLLPQGT PHALLSDPDA PCREIAGFES AKICDTVASV GVGAEAAPGD ALIFSACMEL DLGGMQPLVG TMPEFMHVGT LLARYPEIRP MLDAMERESC SERAGFAGIL ARLADVVAAF IVRGWVECGC GDATGWVQAL REPKLGPAIV ALHRDPGRNW SVAELAAQAG VSRSVFAERF LAATGMTPVR YLTELRMRLA AQWITRDREA IEAVAYRLGY GSLAAFSRAF KRVVGRPPGA MRAEGAEADA
|
| |