10 homologs were found in PanDaTox collection
for query gene Snas_5240 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_5240  hypothetical protein  100 
 
 
407 aa  806    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.111977  normal  0.759757 
 
 
-
 
NC_014158  Tpau_2380  hypothetical protein  51.2 
 
 
339 aa  270  4e-71  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.730708  n/a   
 
 
-
 
NC_013595  Sros_6660  hypothetical protein  39.83 
 
 
336 aa  191  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.736332  normal 
 
 
-
 
NC_013947  Snas_3406  hypothetical protein  33.23 
 
 
375 aa  130  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.396982  normal  0.0134437 
 
 
-
 
NC_013131  Caci_3536  hypothetical protein  31.38 
 
 
323 aa  104  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.585971  normal 
 
 
-
 
NC_011988  Avi_5278  hypothetical protein  28.65 
 
 
348 aa  86.7  7e-16  Agrobacterium vitis S4  Bacteria  normal  0.763948  n/a   
 
 
-
 
NC_010506  Swoo_1556  hypothetical protein  24.54 
 
 
329 aa  69.7  0.0000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.703276  normal 
 
 
-
 
NC_010524  Lcho_3019  hypothetical protein  29.89 
 
 
345 aa  57.4  0.0000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_2133  hypothetical protein  44.04 
 
 
107 aa  56.2  0.0000009  Salinispora arenicola CNS-205  Bacteria  normal  0.722362  normal  0.240575 
 
 
-
 
NC_009832  Spro_1693  hypothetical protein  31.3 
 
 
393 aa  47.8  0.0004  Serratia proteamaculans 568  Bacteria  normal  normal  0.189975 
 
 
-
 
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