Gene Snas_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3406 
Symbol 
ID8884605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3609125 
End bp3610252 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512163 
Protein GI291300885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.396982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0134437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT ATCACGACGC CGTCAACGAC GCCCTGGAAC GCCTCGACGA CCTCGGCTAC 
GAACGCAGCC TCGGCGGCGG CGACCTGGCC AACCACGGAC CCATGGGCGC CGAGACCCTC
GCCGTCCTCG GCCACGGCGA CGCCGTTCCC GCCTGGGTGG CCGTCTACCG CGCCGCCGCA
CCCCACCACG AACCGCCCGT CGCGCACCAG CGACTCGACA GCACTGAGGA CAGTTGGCGA
CCGGCGCTCG GCGACATCGG CCGCGCCGGG GACTTCGAGG AACTGTTCGC CCGCGAGATC
GACGCCGACG GCTGGCAGAC CGTGCTCCAG CGCTGGTGGC CGCGACTGCT GGCCGGACCG
CTGACCGGCC TGACCCACGG CCTCATCCGC ACCGCTCACG CCGTGCGCTC CATCGCCGCC
ACCGACTCCC CCACCGGCAT CCAGCTGACC GAGCTGAGCC GGGGTCTGGG TTACTGGGCT
GCCCGGTTCA TCGACAAGCC CGGCCCCGGA CGGCTTCGCG GCTCGCTGAG CCTGCCGCAG
GCGGTGGCCG CGATGCGCAG GTCCGCGCAG CCGCCCACCA GCCCTGCCGA GGGCCAGCGG
CGGCTGCGGA GCCCCGACGA CATGCCCGGC TACCACGACA ACCTCGAACT GCTTGGTCCC
GAACGGATCC AGTCACTGCT GTCCGACATG ACCGCCGAGT TCGCCGGGGT GTGCGTGGCG
CACTCCAACG GCATGTTCCC GATTCCGCTG GTGCACGGCG TGACCGCACC GGCCGCCGCG
CGGCTGGTAC TGCCCTACCT GCCCGAGGAC CAGCACGAGG CCACCGCGGC GGCGCTGTGG
CAGACCCAGG TCACGCTGGC CATGATCACC ACAGTGGACA GCGGCGGCGA GGCCGAGGCG
CGCGACCGGG CCGCGTCCGC CGAGGTCCCG GCCTGGGACG AGTTGGTGGC GCGGGCCGTG
GACCACAAGG ACGAGCACGT CATCAAGTTC ACCGAGGCCT GCCTGCGCGA ACACACGTTG
CGGCCCGACC CGCGCTACGC CTGGGCTGCC GACCTCGCCC AGCAGCGCAT CGAGCGCCCC
GACGGGGATT CCGGTCCGGC GATGGTGGCG CGGTTCGCCA AACCCTAG
 
Protein sequence
MTTYHDAVND ALERLDDLGY ERSLGGGDLA NHGPMGAETL AVLGHGDAVP AWVAVYRAAA 
PHHEPPVAHQ RLDSTEDSWR PALGDIGRAG DFEELFAREI DADGWQTVLQ RWWPRLLAGP
LTGLTHGLIR TAHAVRSIAA TDSPTGIQLT ELSRGLGYWA ARFIDKPGPG RLRGSLSLPQ
AVAAMRRSAQ PPTSPAEGQR RLRSPDDMPG YHDNLELLGP ERIQSLLSDM TAEFAGVCVA
HSNGMFPIPL VHGVTAPAAA RLVLPYLPED QHEATAAALW QTQVTLAMIT TVDSGGEAEA
RDRAASAEVP AWDELVARAV DHKDEHVIKF TEACLREHTL RPDPRYAWAA DLAQQRIERP
DGDSGPAMVA RFAKP