Gene Caci_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3536 
Symbol 
ID8334889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3949708 
End bp3950679 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content71% 
IMG OID644956679 
Producthypothetical protein 
Protein accessionYP_003114282 
Protein GI256392718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.585971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC CGACCTACAC CGCGGCCATG GACGAAGCCC TCGGCCGGCT CACCCACATC 
GGCTTCGACC AGGGCGGCCG CTTCGCCAGC CACGCCCCGA TGGCCGCCGA GGCCCTGGCC
GCCCTCGGCT TCACCGACGC GGTGTCCGAC TGGGTGGAGT GGAGCAAGAC CGCCCGCCGC
TACAGTTCCG AACCGACCCC CACTGCCCGC ATAGACGTCG GCGACGAGTC CGCCTGGCGC
TCCTGTCTGG GCAGATACCG CCGCGCAGCC GACTGGGCAG CGACCTTCGA AACCCAGATC
AGCGAACACG GCTGGCACGA AGTCCTCATC ACCTGGTGGC CGCGCCTGGT CCCCGGCCTC
AGCGGAGCCC TGACCCACGG CCTGATCCGC ACCGCCCACG CGGTCCGAGG CGTCAGCGCC
ACCCCGGAAC CCACCCCCCT CCAACTCCGC GAACTGGCCC ACGGCCTCGG CTACTGGGCC
GCCGTCTACA CCCCCCTGGG CACGGGCCTG CTCGGCCGCC GCCGCCCCGC CGCCGCCGCT
GACATCCGCA CCGACGTCAT CGACTCAGCC CTCAGCGACC TCACCGCCCG CAACGCCGGC
ATCTACGCCT CCAGCACGAT GTCCCACCCG GTACCACTCG TGCACACGAT CACCGCGCCC
TCGGCGGTCC GGTTGGTACT GGAGCACCTC CCCACCGACC AACACGCCCC CTCCTACCTG
GCCGTGCTCC AAGCCAGCGA AGCCCTCCTC GCCCGCTTCG GCACCCGCGG CATGGGCTGC
CCCGACGGCA CCCCCACCGA ACCCGAACCC GCACACCTGC GGCTCGACCT CCTCGCAGCA
GAAGCAGCGC AACTCCGCGA CGAGCACGCG ATAAAGCTCG CCGAAGCTGC CAGCCGCGAG
TACGCGGTGC GGAACGATAT TCGGTACCTA TCGGCCTCTT GGGCGCTGAT GGAGCGGCTC
AAGCGGTTCT GA
 
Protein sequence
MSAPTYTAAM DEALGRLTHI GFDQGGRFAS HAPMAAEALA ALGFTDAVSD WVEWSKTARR 
YSSEPTPTAR IDVGDESAWR SCLGRYRRAA DWAATFETQI SEHGWHEVLI TWWPRLVPGL
SGALTHGLIR TAHAVRGVSA TPEPTPLQLR ELAHGLGYWA AVYTPLGTGL LGRRRPAAAA
DIRTDVIDSA LSDLTARNAG IYASSTMSHP VPLVHTITAP SAVRLVLEHL PTDQHAPSYL
AVLQASEALL ARFGTRGMGC PDGTPTEPEP AHLRLDLLAA EAAQLRDEHA IKLAEAASRE
YAVRNDIRYL SASWALMERL KRF