Gene Swoo_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1556 
Symbol 
ID6115796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1935179 
End bp1936168 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content36% 
IMG OID641633038 
Producthypothetical protein 
Protein accessionYP_001759937 
Protein GI170725911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.703276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT TAAAATTGTT AGATCTACTA TTAGAAAAAT CAGGCCACTA TCATCCATTA 
TATGGCGATG GTCTAGCAAC ACATTTACCT ATGGTATTAA CGGCTTTAGA TCTTTTAAAT
GCCTCGAGCA TTAAATTGCA ACATACATTC GATGAAAGCA TAAAAGGGCT TGAGGAAATA
GGAAGCTTAG AGGGTGTTAC CTCGGTAAAT GGTATTGACA GTAACCTTGG CAATAGTGAA
AGTTTTAGAT CCTATTTAAC GTATTTCAAA AGCGAGTTAG AACAATGCGG TACACAAGCT
GTACTGAAAA AATCATTACC TATATTAATC TCTGGTGTAG CTGCTTCAGC ATTTCATGGA
CTTATCAGGT TAGCTTATGC AATAGAAGCT AATTGCCAAA GCGAAATGGC TATTGCCCTC
GCATATTGGA GCGCAGAATA TCAGTCATTT GAACTAAATG AAGAAACTAC AAATGAAAGT
CTAGAAAGTA TACTTACTCA GTTATCGCCA TTAGGTGAGA ATCATAAATT TTCACCAGGA
CTTATAGTAG ATAGAATGTC TGAAATCGGC ATATTGTTGA AAAACAAGGG TAGTATTACT
CAGCCGAATA TTATTGACAT ATCAACACTT AGAGAGTTTA CGATAAAGTC ATTTTACTTA
AGTGACGACT TCACTCTTTT GCATACCGTA ACAGGGTGTC ACGCATTATC AATTGTTTTA
CCTTACCTTG AAGATAAGCA AACAGCTCTC AGAGAGTTGT GGAAGGCTAT TGTTGTTGCG
TATTTAAGCA CAGGACTTCG TTATCAAGAT AAAGAGATCA CAACTGTTGA AAAAAACATT
AATTTTTCGC CTATCATCGA AAAAGCACTA AAGTCAGAAG ATTCGCACGC TATTAAATTG
GTCTATACGT GTCTTTGTGA ATATAAGAAC TGGAATGATC CTTTATATTT TACCGTTTCA
AAAAGGGCAA TATTGAACAG TCACAGCTAA
 
Protein sequence
MEELKLLDLL LEKSGHYHPL YGDGLATHLP MVLTALDLLN ASSIKLQHTF DESIKGLEEI 
GSLEGVTSVN GIDSNLGNSE SFRSYLTYFK SELEQCGTQA VLKKSLPILI SGVAASAFHG
LIRLAYAIEA NCQSEMAIAL AYWSAEYQSF ELNEETTNES LESILTQLSP LGENHKFSPG
LIVDRMSEIG ILLKNKGSIT QPNIIDISTL REFTIKSFYL SDDFTLLHTV TGCHALSIVL
PYLEDKQTAL RELWKAIVVA YLSTGLRYQD KEITTVEKNI NFSPIIEKAL KSEDSHAIKL
VYTCLCEYKN WNDPLYFTVS KRAILNSHS