Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1556 |
Symbol | |
ID | 6115796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1935179 |
End bp | 1936168 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641633038 |
Product | hypothetical protein |
Protein accession | YP_001759937 |
Protein GI | 170725911 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.703276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAT TAAAATTGTT AGATCTACTA TTAGAAAAAT CAGGCCACTA TCATCCATTA TATGGCGATG GTCTAGCAAC ACATTTACCT ATGGTATTAA CGGCTTTAGA TCTTTTAAAT GCCTCGAGCA TTAAATTGCA ACATACATTC GATGAAAGCA TAAAAGGGCT TGAGGAAATA GGAAGCTTAG AGGGTGTTAC CTCGGTAAAT GGTATTGACA GTAACCTTGG CAATAGTGAA AGTTTTAGAT CCTATTTAAC GTATTTCAAA AGCGAGTTAG AACAATGCGG TACACAAGCT GTACTGAAAA AATCATTACC TATATTAATC TCTGGTGTAG CTGCTTCAGC ATTTCATGGA CTTATCAGGT TAGCTTATGC AATAGAAGCT AATTGCCAAA GCGAAATGGC TATTGCCCTC GCATATTGGA GCGCAGAATA TCAGTCATTT GAACTAAATG AAGAAACTAC AAATGAAAGT CTAGAAAGTA TACTTACTCA GTTATCGCCA TTAGGTGAGA ATCATAAATT TTCACCAGGA CTTATAGTAG ATAGAATGTC TGAAATCGGC ATATTGTTGA AAAACAAGGG TAGTATTACT CAGCCGAATA TTATTGACAT ATCAACACTT AGAGAGTTTA CGATAAAGTC ATTTTACTTA AGTGACGACT TCACTCTTTT GCATACCGTA ACAGGGTGTC ACGCATTATC AATTGTTTTA CCTTACCTTG AAGATAAGCA AACAGCTCTC AGAGAGTTGT GGAAGGCTAT TGTTGTTGCG TATTTAAGCA CAGGACTTCG TTATCAAGAT AAAGAGATCA CAACTGTTGA AAAAAACATT AATTTTTCGC CTATCATCGA AAAAGCACTA AAGTCAGAAG ATTCGCACGC TATTAAATTG GTCTATACGT GTCTTTGTGA ATATAAGAAC TGGAATGATC CTTTATATTT TACCGTTTCA AAAAGGGCAA TATTGAACAG TCACAGCTAA
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Protein sequence | MEELKLLDLL LEKSGHYHPL YGDGLATHLP MVLTALDLLN ASSIKLQHTF DESIKGLEEI GSLEGVTSVN GIDSNLGNSE SFRSYLTYFK SELEQCGTQA VLKKSLPILI SGVAASAFHG LIRLAYAIEA NCQSEMAIAL AYWSAEYQSF ELNEETTNES LESILTQLSP LGENHKFSPG LIVDRMSEIG ILLKNKGSIT QPNIIDISTL REFTIKSFYL SDDFTLLHTV TGCHALSIVL PYLEDKQTAL RELWKAIVVA YLSTGLRYQD KEITTVEKNI NFSPIIEKAL KSEDSHAIKL VYTCLCEYKN WNDPLYFTVS KRAILNSHS
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