6 homologs were found in PanDaTox collection
for query gene Smed_1226 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1226  hypothetical protein  100 
 
 
43 aa  89.4  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.0248599  normal  0.257925 
 
 
-
 
NC_007643  Rru_A0809  hypothetical protein  79.07 
 
 
646 aa  79.3  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2939  hypothetical protein  50 
 
 
631 aa  46.6  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0719  hypothetical protein  41.86 
 
 
641 aa  44.7  0.0004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009957  Dshi_3986  hypothetical protein  50 
 
 
634 aa  44.3  0.0005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.946958  n/a   
 
 
-
 
NC_009719  Plav_2049  hypothetical protein  50 
 
 
631 aa  43.5  0.001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.977561  hitchhiker  0.00020723 
 
 
-
 
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