13 homologs were found in PanDaTox collection
for query gene Slin_6618 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_6618  hypothetical protein  100 
 
 
169 aa  344  3e-94  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2945  hypothetical protein  40.14 
 
 
137 aa  113  2.0000000000000002e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3520  hypothetical protein  26.83 
 
 
172 aa  82.4  0.000000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0899  hypothetical protein  31.68 
 
 
155 aa  77.8  0.00000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1665  hypothetical protein  29.8 
 
 
142 aa  60.5  0.00000001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.171553 
 
 
-
 
NC_013730  Slin_3072  Anti-sigma-K factor RskA  37.8 
 
 
274 aa  59.7  0.00000002  Spirosoma linguale DSM 74  Bacteria  normal  0.865859  normal 
 
 
-
 
NC_013132  Cpin_0900  hypothetical protein  23.31 
 
 
159 aa  57.4  0.0000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4472  hypothetical protein  35.29 
 
 
297 aa  51.6  0.000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.370126 
 
 
-
 
NC_013061  Phep_0511  hypothetical protein  41.67 
 
 
294 aa  49.7  0.00002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.194479  normal  0.142642 
 
 
-
 
NC_008255  CHU_0347  hypothetical protein  40 
 
 
276 aa  48.9  0.00004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.238012 
 
 
-
 
NC_013132  Cpin_1908  hypothetical protein  29.13 
 
 
277 aa  45.8  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1906  hypothetical protein  30.93 
 
 
287 aa  44.7  0.0007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1970  hypothetical protein  25.98 
 
 
137 aa  41.6  0.006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0162497  normal  0.0491254 
 
 
-
 
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