Gene Cpin_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1970 
Symbol 
ID8358121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2405704 
End bp2406117 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID644964158 
Producthypothetical protein 
Protein accessionYP_003121667 
Protein GI256421014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0162497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0491254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG AGCGTTACAT ATCAGATGGA AATCTGGAAA AAGTGCTCCT CGGATTCGCA 
AGCCCTGAAG AGGAAGCCGA GTATCGGATA CACATGGACT TCTTTCCGGA AGTTCAGACC
GAACAGGACG AAATCGAACG CCGTATTGAA CGCATGGCGT TCAAGGACGC CGCTTTGCCA
CCTGCGCACC TGAAAACAGC GATCATGCAA CAGGTCGCAC AGGAAGCTGC TGCTCCGGTT
ACCACCGGTA CATGGTATAA CAGGAAAGAT GTCCATTACG AAAACGTACA GCCACCTTCC
AATAAAATGA GGGTGCACGT AGGATGGAAA TTGTTACTCA TCGTCTTCCT GGTAATGATT
GCTGCATCTA TGGCTGCTGC AATTATCTTC TTTTATATGA CCATCGGTAA ATAA
 
Protein sequence
MDYERYISDG NLEKVLLGFA SPEEEAEYRI HMDFFPEVQT EQDEIERRIE RMAFKDAALP 
PAHLKTAIMQ QVAQEAAAPV TTGTWYNRKD VHYENVQPPS NKMRVHVGWK LLLIVFLVMI
AASMAAAIIF FYMTIGK