7 homologs were found in PanDaTox collection
for query gene Cpin_1970 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_1970  hypothetical protein  100 
 
 
137 aa  286  9e-77  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0162497  normal  0.0491254 
 
 
-
 
NC_013132  Cpin_0899  hypothetical protein  30.3 
 
 
155 aa  60.8  0.000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0900  hypothetical protein  25.18 
 
 
159 aa  58.5  0.00000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4472  hypothetical protein  36.36 
 
 
297 aa  50.4  0.000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.370126 
 
 
-
 
NC_013132  Cpin_1908  hypothetical protein  27.42 
 
 
277 aa  48.9  0.00002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3072  Anti-sigma-K factor RskA  29.17 
 
 
274 aa  45.4  0.0003  Spirosoma linguale DSM 74  Bacteria  normal  0.865859  normal 
 
 
-
 
NC_013061  Phep_0511  hypothetical protein  37.66 
 
 
294 aa  43.5  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.194479  normal  0.142642 
 
 
-
 
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