Gene Dfer_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4472 
Symbol 
ID8228075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5399869 
End bp5400762 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID644932318 
Producthypothetical protein 
Protein accessionYP_003088838 
Protein GI255038217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.370126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCC AAGCCTATAT AGAGTCCGGT ATATTGGAGG AATATGTATT GGGCACTGTC 
TCTCCCCAGG AGAAACAGGA GGTGGAGTGT ATGTCGCATA TTTACCCTGA GATCAAGGAA
GAGCTGTTGC GTACCGAAAG TGCATTGGAA GAATATGCAC TGAAACACCA GGCAACGCCG
CCCCCTTCAT TGAAGGATTC GATTTTTGCG CAGATGAATT TCGACGCTGC GCCGGAAGGA
GAAGAGCAGT CCGAAGAAAC CGACGAAAAG ATTATCCCGC TCGCCGACGG CACCGCCACC
GTGCAGCCGG CACCCGTGGA AGCGCCCGTG ATCGACCATG CGTTCGACCG CGTGGAAACG
CAGGTCGTGA CGCCCACCTG GGCCAAACTG GCCGTAGCGG CTGCGGTATT GCTCGCATTG
TTTGCAGGAT GGTCGGCCAT GCAGATGACC GACATGAAGA GCGCCAACAA CGAAGCCGTA
GCCAAAGTGG AAAGCATGGA GGCCGATATG GCGGCGATGA AAGCGCAGAC CGAATACAAC
GAGGCCGTAG CCGCGCTGTT CCGCAGCCCT ACTTACAAGC ACGTGCATTT GGCAGGCTTG
CCCAAGTCGC CCGAAAGCGC CGTATCCGCA TTCTGGAACA CGCAGACTAA CGAAGTGCTG
CTGGACGTGC AAAACCTCCC TGCCGCGCCC CAGGGCAAGC AATACCAGCT TTGGAGCATC
GTGGACGGCA AACCGGTAGA CATTGGTATG CTGGACAATG CATTCACGGG CAAAGTTTTG
AAAATGAAAA ACACCAAAGC CGGTTCCGCC GCATTCGCCA TTACTTTGGA AAAAGAAGGC
GGCAACCCGA CCCCGACGAT GGAGGAAATG TATGTGATGG GGAAAGTGGT GTAG
 
Protein sequence
MNIQAYIESG ILEEYVLGTV SPQEKQEVEC MSHIYPEIKE ELLRTESALE EYALKHQATP 
PPSLKDSIFA QMNFDAAPEG EEQSEETDEK IIPLADGTAT VQPAPVEAPV IDHAFDRVET
QVVTPTWAKL AVAAAVLLAL FAGWSAMQMT DMKSANNEAV AKVESMEADM AAMKAQTEYN
EAVAALFRSP TYKHVHLAGL PKSPESAVSA FWNTQTNEVL LDVQNLPAAP QGKQYQLWSI
VDGKPVDIGM LDNAFTGKVL KMKNTKAGSA AFAITLEKEG GNPTPTMEEM YVMGKVV