10 homologs were found in PanDaTox collection
for query gene Shewmr4_3381 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_3381  hypothetical protein  100 
 
 
177 aa  359  1e-98  Shewanella sp. MR-4  Bacteria  normal  normal  0.870731 
 
 
-
 
NC_008577  Shewana3_3551  hypothetical protein  92.09 
 
 
176 aa  303  8.000000000000001e-82  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0572  hypothetical protein  81.92 
 
 
177 aa  275  2e-73  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0720  hypothetical protein  63.19 
 
 
169 aa  197  5e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0493  hypothetical protein  50 
 
 
168 aa  147  5e-35  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_2463  hypothetical protein  50 
 
 
392 aa  72.4  0.000000000003  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_1547  hypothetical protein  51.79 
 
 
382 aa  68.2  0.00000000006  Methanospirillum hungatei JF-1  Archaea  normal  0.197363  normal  0.11395 
 
 
-
 
NC_009483  Gura_0102  hypothetical protein  31.18 
 
 
125 aa  64.3  0.0000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0332  putative lipoprotein  41.18 
 
 
134 aa  60.8  0.000000009  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02579  ribose-phosphate pyrophosphokinase  33.33 
 
 
169 aa  52.4  0.000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.146868  n/a   
 
 
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