Gene Memar_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2463 
Symbol 
ID4846870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2439705 
End bp2440883 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID640117173 
Producthypothetical protein 
Protein accessionYP_001048366 
Protein GI126180401 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAT CCTATCCGAG CTATCTGGTT ATTTTCCTCG TTCTCTTCGG GGCTGTCGTT 
GCATGCGGGT GCATGGCTGC CGGGGGAGAG GACGAGCCGG CCGAGCGCAT CTCCGGGAAC
GGCACGATCA CGTTCGTCGA TCTTGAAGGT GGGTTCTACG GGATCGTCGC CGATGACGGC
GAACGTTACC TCCCCGCCGA CCTCCCGACT GAATGCCGGC AGGACGGCCT CCGTGTCGCG
TTCGCCGTCA ATATCATGAA CGAGACGGCA ACCATCCAGC AGTGGGGGAC GCCGGTCGAG
ATAGTCGAGA TCGCGGCGGG CGACACCCGC CGGACGGTCG CGGCGAACGC TACGGTCACC
TACATCGACC TCGAGGGCGG GTTCTACGGC CTCGTCACCG ACGACGGCAG GAAATTCCTG
CCCGGAAACC TCCCGGCGGA GTACCGGCAG GACGGTCTTT TAGTGCAGTT CAGCGCCGAC
GTGCAGGATG ACGTCGCGGG GATTGGGATG TGGGGAACTC CTGTGGAGAT CCGGTCGATC
GAACTGGTTG AAGGCGTCCT GCTCGTCTCC GGGAACGCCA CGGTCACCTA CATCGATCTC
GAGGGTGGGT TCTACGGCCT CGTCGCCGAC GACGGCAGGC ACTACCTCCC GCTCGGTCTC
GACGAAGCCT GGCAGACGGA CGGGGCGAAC GTGACGTTCG TTGCCCGGAT CAAGGAGAAC
ACCATGACCA TCCAGCAGTG GGGCACCCCG GTCGAGGTCA TCGCCATCGA TACGGCAGGG
AACGCGACCT ACGTCGCAAA GACCGGGACG GTCACGTTCG TCGACCTCGA GGGCGGGTTC
TACGGGATCG TCGCCGACGA CGGCGAACGT TATCTTCCGC TCGATCTCGA CGAGACCTAC
CGCGTCGACG GAATGCGCCT TACCTTCGTC GGGGAGATAG CCCGGGATAC CGCGACGATC
CAGCAGTGGG GAACCCCTAT CGAGATCGTT GACATCCCGT GGGCCTGCGC CCGGTGCAGT
GAAACCGTCG GCCTCGCGAA CCCGGCCGCG GTCTGGTGTA AGGAGCAGGG CCACACCTAC
GAGATCCGGA AGAACCCCGA CGGCAGCGAG TACGGTGTCT GTATCTTTGC AAACGGCACC
GCAGTCGACG CCTGGGACTA CTACCGGCAG ACCCACTGA
 
Protein sequence
MTGSYPSYLV IFLVLFGAVV ACGCMAAGGE DEPAERISGN GTITFVDLEG GFYGIVADDG 
ERYLPADLPT ECRQDGLRVA FAVNIMNETA TIQQWGTPVE IVEIAAGDTR RTVAANATVT
YIDLEGGFYG LVTDDGRKFL PGNLPAEYRQ DGLLVQFSAD VQDDVAGIGM WGTPVEIRSI
ELVEGVLLVS GNATVTYIDL EGGFYGLVAD DGRHYLPLGL DEAWQTDGAN VTFVARIKEN
TMTIQQWGTP VEVIAIDTAG NATYVAKTGT VTFVDLEGGF YGIVADDGER YLPLDLDETY
RVDGMRLTFV GEIARDTATI QQWGTPIEIV DIPWACARCS ETVGLANPAA VWCKEQGHTY
EIRKNPDGSE YGVCIFANGT AVDAWDYYRQ TH