10 homologs were found in PanDaTox collection
for query gene CPS_0332 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0332  putative lipoprotein  100 
 
 
134 aa  271  2.0000000000000002e-72  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0493  hypothetical protein  45.59 
 
 
168 aa  73.6  0.0000000000008  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_2463  hypothetical protein  40.54 
 
 
392 aa  72.4  0.000000000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_1547  hypothetical protein  44.44 
 
 
382 aa  71.6  0.000000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.197363  normal  0.11395 
 
 
-
 
NC_004347  SO_0720  hypothetical protein  41.18 
 
 
169 aa  62.4  0.000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3551  hypothetical protein  42.65 
 
 
176 aa  62.4  0.000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0572  hypothetical protein  47.37 
 
 
177 aa  61.6  0.000000004  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3381  hypothetical protein  41.18 
 
 
177 aa  60.8  0.000000006  Shewanella sp. MR-4  Bacteria  normal  normal  0.870731 
 
 
-
 
NC_011138  MADE_02579  ribose-phosphate pyrophosphokinase  29.21 
 
 
169 aa  51.2  0.000005  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.146868  n/a   
 
 
-
 
NC_009483  Gura_0102  hypothetical protein  31.08 
 
 
125 aa  45.1  0.0003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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