| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02579 |
|---|
| Symbol | |
|---|
| ID | 6778323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2801562 |
|---|
| End bp | 2802071 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642756020 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_002126869 |
|---|
| Protein GI | 196157380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.146868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAGCCC AACAAATTGT AAATGTACTA CTACGTGGTA AAGGAAATAA AAAAATGAAA
ACTAACCGAC TCAACTTAGT ACTTATCTTG ACGTCTATGA CATTGCTAGG CGCATGCGCA
GAAGAAGAAA AGAAAGAGAA CCTTGCGATG ACTGACAAAA AAGAACAAAT TCAGCAAAAC
AGTGAAGATT TACCTAAAGA GCTCGTCGCT GAGCCAGTAA CGCAGGCGGA AGCTGTGGAA
GCCGATGCAA AAGGTGAAGT AACAATGAAG GGCAGCATTT TTTATAAAGA TCTTGAAGGC
GGCTTTTATG CCTTTATTGC CGAGAACGGT GACCGTTACA CCCTGCACGG TCTAGATGAA
ACATATCAAA AGAATGGTCT TATTGTTGAA GTTAAAGGCA CGCCCAAACC TGATTTGATG
ACCTTCACTC AATTTGGCAC CGTATTACAA GTGACGTCGG TAAAGGTATT GGATACCAGT
AAGGTCATTG ATAGCCTACC CACTAAGTGA
|
|---|
| Protein sequence | MQAQQIVNVL LRGKGNKKMK TNRLNLVLIL TSMTLLGACA EEEKKENLAM TDKKEQIQQN
SEDLPKELVA EPVTQAEAVE ADAKGEVTMK GSIFYKDLEG GFYAFIAENG DRYTLHGLDE
TYQKNGLIVE VKGTPKPDLM TFTQFGTVLQ VTSVKVLDTS KVIDSLPTK
|
|---|
| |