14 homologs were found in PanDaTox collection
for query gene Shel_22040 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_22040  CRISPR-associated protein Cas2  100 
 
 		 123 aa  254  3e-67  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  hitchhiker  0.00451798 
 
 
-
 
NC_008532  STER_1475  CRISPR-associated Cas2 family protein  30.19 
 
 		 114 aa  60.1  0.00000001  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_3118  CRISPR-associated protein Cas2  32.14 
 
 		 115 aa  59.3  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_4487  hypothetical protein  40 
 
 		 109 aa  57.4  0.00000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0501523  normal  0.111431 
 
 
-
 
NC_004116  SAG0896  oxidoreductase, putative  32.38 
 
 		 108 aa  57  0.00000009  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0465757  n/a   
 
 
-
 
NC_011365  Gdia_0345  CRISPR-associated protein Cas2  31.58 
 
 		 109 aa  56.6  0.0000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0897014  normal  0.0328291 
 
 
-
 
NC_011992  Dtpsy_0058  CRISPR-associated protein Cas2  34.15 
 
 		 102 aa  56.2  0.0000002  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010655  Amuc_2008  CRISPR-associated protein Cas2  30.49 
 
 		 103 aa  52.8  0.000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.959025  normal  0.141931 
 
 
-
 
NC_009719  Plav_0097  CRISPR-associated Cas2 family protein  33.33 
 
 		 101 aa  50.8  0.000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.104167  normal  0.518264 
 
 
-
 
NC_008532  STER_0711  hypothetical protein  31.18 
 
 		 107 aa  48.9  0.00003  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000727859  n/a   
 
 
-
 
NC_009952  Dshi_0402  CRISPR-associated protein Cas2  28.4 
 
 		 114 aa  45.4  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.687205 
 
 
-
 
NC_002967  TDE0329  CRISPR-associated Cas2 family protein  31.76 
 
 		 101 aa  45.1  0.0003  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_003912  CJE1694  CRISPR-associated Cas2 family protein  30.26 
 
 		 143 aa  40.8  0.006  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1873  CRISPR-associated Cas2 family protein  30.26 
 
 		 143 aa  40.8  0.006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>