Gene TDE0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0329 
Symbol 
ID2741545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp366082 
End bp366387 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content31% 
IMG OID637159201 
ProductCRISPR-associated Cas2 family protein 
Protein accessionNP_970943 
Protein GI42525845 
COG category[S] Function unknown 
COG ID[COG3512] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTCA TCGTTTTTTT TGATTTACCC GTAATAACAC CCGAAAATAG GCATAATTAT 
TCGGTTTTTA GGAAGTATCT AATTAAATCC GGCTTTATTA TGCAGCAAAA GTCGGTTTAT
TCAAAATTGG TTTTAAATCT TACAAATAGA GACTCTATTG TAAAAAGTAT AGAGAAGAAT
AAACCTCCAG AAGGCTTGGT TGAAGTATTA ACCGTCACCG AAAAGCAATA TGCAAAAATG
GAAATTATTA TTGGAGAATC TAAAACAGAA TATTTAAATA CCGATGAAAG GCTTGTTGTT
CTATGA
 
Protein sequence
MRVIVFFDLP VITPENRHNY SVFRKYLIKS GFIMQQKSVY SKLVLNLTNR DSIVKSIEKN 
KPPEGLVEVL TVTEKQYAKM EIIIGESKTE YLNTDERLVV L