22 homologs were found in PanDaTox collection
for query gene TDE0329 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE0329  CRISPR-associated Cas2 family protein  100 
 
 
101 aa  202  9e-52  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1475  CRISPR-associated Cas2 family protein  48.51 
 
 
114 aa  103  9e-22  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0896  oxidoreductase, putative  48.51 
 
 
108 aa  101  4e-21  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0465757  n/a   
 
 
-
 
NC_011992  Dtpsy_0058  CRISPR-associated protein Cas2  45.45 
 
 
102 aa  83.6  9e-16  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4487  hypothetical protein  40.4 
 
 
109 aa  81.6  0.000000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0501523  normal  0.111431 
 
 
-
 
NC_011365  Gdia_0345  CRISPR-associated protein Cas2  39.18 
 
 
109 aa  77.4  0.00000000000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0897014  normal  0.0328291 
 
 
-
 
NC_011898  Ccel_3118  CRISPR-associated protein Cas2  41.41 
 
 
115 aa  75.9  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_2008  CRISPR-associated protein Cas2  41.18 
 
 
103 aa  73.9  0.0000000000007  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.959025  normal  0.141931 
 
 
-
 
NC_009719  Plav_0097  CRISPR-associated Cas2 family protein  38.64 
 
 
101 aa  72.8  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.104167  normal  0.518264 
 
 
-
 
NC_008532  STER_0711  hypothetical protein  38.24 
 
 
107 aa  71.2  0.000000000004  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000727859  n/a   
 
 
-
 
NC_003912  CJE1694  CRISPR-associated Cas2 family protein  40 
 
 
143 aa  67.4  0.00000000007  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1873  CRISPR-associated Cas2 family protein  40 
 
 
143 aa  67.4  0.00000000007  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1061  CRISPR-associated protein Cas2  41.11 
 
 
104 aa  64.3  0.0000000005  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_1232  CRISPR-associated Cas2 family protein  34.09 
 
 
101 aa  63.2  0.000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1904  hypothetical protein  38.46 
 
 
110 aa  62  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.246432  n/a   
 
 
-
 
NC_009952  Dshi_0402  CRISPR-associated protein Cas2  37.66 
 
 
114 aa  60.1  0.00000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.687205 
 
 
-
 
NC_007643  Rru_A0452  CRISPR-associated Cas2 family protein  32.14 
 
 
112 aa  55.5  0.0000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.220536  n/a   
 
 
-
 
NC_007406  Nwi_0953  hypothetical protein  32.95 
 
 
101 aa  55.1  0.0000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.82432 
 
 
-
 
NC_008578  Acel_1949  CRISPR-associated Cas2 family protein  27.27 
 
 
108 aa  53.9  0.0000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_0245  CRISPR-associated Cas2 family protein  33.33 
 
 
108 aa  49.3  0.00002  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_22040  CRISPR-associated protein Cas2  31.76 
 
 
123 aa  45.1  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  hitchhiker  0.00451798 
 
 
-
 
NC_002976  SERP2462  CRISPR-associated Cas2 family protein  27.72 
 
 
101 aa  43.5  0.0009  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0196448  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>