Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22040 |
Symbol | |
ID | 8396093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2444637 |
End bp | 2445008 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644986952 |
Product | CRISPR-associated protein Cas2 |
Protein accession | YP_003144563 |
Protein GI | 257064891 |
COG category | [S] Function unknown |
COG ID | [COG3512] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00451798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGGTGG TCTGCGGAAC CAACCAAAGA CCGAGCGCCA TGCTCATGGC CACTGAGGCG AACGTGCGCC ATACGCTCGT ACCGCTGAAA CCGACGAACA AACATGGAAC GAAAACCTCA TACCCGAAGT TCCGCAAAGC ACTGCGTGAC GACGGGTTCG TCATGGTGGC GCCTGAGCTG TACATGCGCG TGGTGGCGAA CCGGAAAGCG ATTCGCAAGC ACCTCAAACG AATGGCCGAA AAGCTGCCTG AAACGGACAC CGTCGTGACG CTTTCCCTTA CAGAAAAGCA GTGGGAGAAA ATGGTGTATC TGGTGGGTGA AAAAAGCGAT CAAGAACTGC TAGTGGGAGG AAAATCCCAT GTCATTCTAT AG
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Protein sequence | MVVVCGTNQR PSAMLMATEA NVRHTLVPLK PTNKHGTKTS YPKFRKALRD DGFVMVAPEL YMRVVANRKA IRKHLKRMAE KLPETDTVVT LSLTEKQWEK MVYLVGEKSD QELLVGGKSH VIL
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