9 homologs were found in PanDaTox collection
for query gene Sde_3076 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3076  hypothetical protein  100 
 
 
146 aa  303  5.0000000000000004e-82  Saccharophagus degradans 2-40  Bacteria  normal  0.499668  normal 
 
 
-
 
NC_007492  Pfl01_4328  hypothetical protein  28.68 
 
 
141 aa  49.7  0.00001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.295995  normal 
 
 
-
 
NC_006369  lpl2121  hypothetical protein  28.69 
 
 
148 aa  48.5  0.00003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_07250  hypothetical protein  24.63 
 
 
218 aa  48.9  0.00003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03879  hypothetical protein  29.41 
 
 
143 aa  47  0.00008  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2146  hypothetical protein  28.23 
 
 
148 aa  46.6  0.0001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_0660  hypothetical protein  24.63 
 
 
141 aa  46.6  0.0001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.4113  n/a   
 
 
-
 
NC_009439  Pmen_1336  ketosteroid isomerase-like protein  26.72 
 
 
140 aa  42.4  0.002  Pseudomonas mendocina ymp  Bacteria  normal  0.0916709  normal 
 
 
-
 
NC_008699  Noca_4101  hypothetical protein  28.91 
 
 
182 aa  40.8  0.006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>